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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100246751   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 vvi-r.5   100246751   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 vvi-m.5   100246751   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 vvi-u.5   100262150   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 ath-u.5   AT3G46870   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100798492   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 gma-u.5   100306428   pentatricopeptide repeat-containing protein 
 ppo-u.5   7468604   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 mtr-u.5   25492548   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 sly-u.5   101247961   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 osa-u.5   4343537   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 zma-u.5   100276080   uncharacterized LOC100276080 

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Top 50 coexpressed genes to 100246751 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100246751 (vvi-u.5 coexpression data)

CoexMap"100246751"


vviLOC100246751 | Entrez gene ID : 100246751      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010650970.1 [sequence] [blastp]
XP_019076196.1 [sequence] [blastp]
XP_059593466.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto 2,  chlo 1,  extr 1,  golg 1  (predict for XP_010650970.1)
mito 6,  cyto 2,  chlo 1,  extr 1,  golg 1  (predict for XP_019076196.1)
mito 6,  cyto 2,  chlo 1,  extr 1,  golg 1  (predict for XP_059593466.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_010650970.1)
mito 2  (predict for XP_019076196.1)
mito 2  (predict for XP_059593466.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100246751
vvi-r.5
for
100246751
vvi-m.5
for
100246751
vvi-u.5
for
100262150
ath-u.5
for
AT3G46870
gma-u.5
for
100798492
gma-u.5
for
100306428
ppo-u.5
for
7468604
mtr-u.5
for
25492548
sly-u.5
for
101247961
osa-u.5
for
4343537
zma-u.5
for
100276080


Ortholog ID: 10131
Species vvi vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100262150 LOC100246751 AT3G46870 LOC100798492 LOC100306428 LOC103873288 LOC7468604 LOC25492548 LOC107906585 LOC107959151 LOC106347557 LOC106352756 LOC102616143 LOC101247961 LOC102602447 LOC107764576 LOC107764222 LOC4343537 LOC100276080 LOC123188339 LOC123052455 LOC123429889 LOC8084103 LOC100826421
Function* protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein protein THYLAKOID ASSEMBLY 8-like, chloroplastic pentatricopeptide repeat-containing protein protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic pentatricopeptide repeat-containing protein At3g46870 protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic uncharacterized LOC100276080 protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic pentatricopeptide repeat-containing protein At3g46870 protein THYLAKOID ASSEMBLY 8-like, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03018 RNA degradation 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100262150 100246751 823840 100798492 100306428 103873288 7468604 25492548 107906585 107959151 106347557 106352756 102616143 101247961 102602447 107764576 107764222 4343537 100276080 123188339 123052455 123429889 8084103 100826421
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