ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100246770	aminoaldehyde dehydrogenase 2, peroxisomal
vvi-r.5	100246770	aminoaldehyde dehydrogenase 2, peroxisomal
vvi-m.5	100246770	aminoaldehyde dehydrogenase 2, peroxisomal
vvi-u.5	100250859	aminoaldehyde dehydrogenase 2, peroxisomal
ath-u.5	ALDH10A9	aldehyde dehydrogenase 10A9
ath-u.5	ALDH10A8	aldehyde dehydrogenase 10A8
gma-u.5	ALDH10A1	betaine aldehyde dehydrogenase
gma-u.5	ALDH10A2	betaine aldehyde dehydrogenase
ppo-u.5	7462540	aminoaldehyde dehydrogenase 2, peroxisomal
ppo-u.5	7484775	aminoaldehyde dehydrogenase 2, peroxisomal
mtr-u.5	25489571	betaine aldehyde dehydrogenase 1, chloroplastic
mtr-u.5	25489568	betaine aldehyde dehydrogenase 1, chloroplastic
mtr-u.5	11412053	betaine aldehyde dehydrogenase 1, chloroplastic
sly-u.5	ADH10A9	putative betaine aldehyde dehyrogenase
sly-u.5	amadh2	aminoaldehyde dehydrogenase 2
osa-u.5	4345606	betaine aldehyde dehydrogenase 2-like
osa-u.5	4336081	betaine aldehyde dehydrogenase 1-like
zma-u.5	606443	betaine aldehyde dehydrogenase
zma-u.5	541949	betaine aldehyde dehydrogenase

Top 50 coexpressed genes to 100246770 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100246770 (vvi-u.5 coexpression data)

CoexMap"100246770"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi00260 [list] [network] Glycine, serine and threonine metabolism (63 genes)

vvi00670 [list] [network] One carbon pool by folate (40 genes)

GO BP

GO CC

GO MF

GO:0016620 [list] [network] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

(42 genes)

IEA

Protein

XP_002283690.1 [sequence] [blastp]
XP_059590002.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, pero 3, cyto_pero 3, chlo 1, cyto_plas 1	(predict for XP_002283690.1)
cyto 5, chlo 3, nucl 1, cysk_nucl 1	(predict for XP_059590002.1)

Subcellular
localization
TargetP

other 7	(predict for XP_002283690.1)
other 7	(predict for XP_059590002.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100246770	vvi-r.5 for 100246770	vvi-m.5 for 100246770	vvi-u.5 for 100250859	ath-u.5 for ALDH10A9	ath-u.5 for ALDH10A8	gma-u.5 for ALDH10A1	gma-u.5 for ALDH10A2	ppo-u.5 for 7462540	ppo-u.5 for 7484775	mtr-u.5 for 25489571	mtr-u.5 for 25489568	mtr-u.5 for 11412053	sly-u.5 for ADH10A9	sly-u.5 for amadh2	osa-u.5 for 4345606	osa-u.5 for 4336081	zma-u.5 for 606443	zma-u.5 for 541949

Ortholog

Ortholog ID: 3699

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

amadh2

ADH10A9

Function^*

aminoaldehyde dehydrogenase 2, peroxisomal

aldehyde dehydrogenase 10A8

aldehyde dehydrogenase 10A9

betaine aldehyde dehydrogenase

betaine aldehyde dehydrogenase 2, mitochondrial

betaine aldehyde dehydrogenase 1, chloroplastic

aminoaldehyde dehydrogenase 2, peroxisomal

betaine aldehyde dehydrogenase 1, chloroplastic

aminoaldehyde dehydrogenase ALDH10A9, peroxisomal-like

aminoaldehyde dehydrogenase ALDH10A8, chloroplastic

aminoaldehyde dehydrogenase 2, peroxisomal

aminoaldehyde dehydrogenase 2

putative betaine aldehyde dehyrogenase

betaine aldehyde dehydrogenase, chloroplastic

betaine aldehyde dehydrogenase, chloroplastic-like

betaine aldehyde dehydrogenase 2-like

betaine aldehyde dehydrogenase 1-like

betaine aldehyde dehydrogenase

betaine aldehyde dehydrogenase 2

betaine aldehyde dehydrogenase

betaine aldehyde dehydrogenase 2

betaine aldehyde dehydrogenase 1

betaine aldehyde dehydrogenase 2

betaine aldehyde dehydrogenase

3-chloroallyl aldehyde dehydrogenase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3
vvi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath00620	Pyruvate metabolism	2
ath00270	Cysteine and methionine metabolism	2
ath00280	Valine, leucine and isoleucine degradation	2
ath00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	6
ath00020	Citrate cycle (TCA cycle)	3
ath04146	Peroxisome	3
ath00480	Glutathione metabolism	2
ath01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
gma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	6
gma00190	Oxidative phosphorylation	2
gma00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra00190	Oxidative phosphorylation	5
bra00710	Carbon fixation by Calvin cycle	4
bra00010	Glycolysis / Gluconeogenesis	3
bra04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00620	Pyruvate metabolism	3
ppo00010	Glycolysis / Gluconeogenesis	2
ppo01200	Carbon metabolism	2
ppo00270	Cysteine and methionine metabolism	2
ppo00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	5
ppo00260	Glycine, serine and threonine metabolism	2
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	3
mtr01200	Carbon metabolism	3
mtr00240	Pyrimidine metabolism	2
mtr00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	3
mtr00260	Glycine, serine and threonine metabolism	3
mtr00670	One carbon pool by folate	3
mtr01240	Biosynthesis of cofactors	2
mtr00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00340	Histidine metabolism	3
bna01230	Biosynthesis of amino acids	3
bna00260	Glycine, serine and threonine metabolism	3
bna00670	One carbon pool by folate	3
bna03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	2
bna00670	One carbon pool by folate	2
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	3
cit00020	Citrate cycle (TCA cycle)	3
cit00620	Pyruvate metabolism	3
cit00785	Lipoic acid metabolism	3
cit01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	6
sly00520	Amino sugar and nucleotide sugar metabolism	4
sly01250	Biosynthesis of nucleotide sugars	4
sly01230	Biosynthesis of amino acids	2
sly00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	2
sot00670	One carbon pool by folate	2
sot01200	Carbon metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	2
sot00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	9
nta00260	Glycine, serine and threonine metabolism	2
nta00670	One carbon pool by folate	2
nta00020	Citrate cycle (TCA cycle)	2
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00670	One carbon pool by folate	4
nta00900	Terpenoid backbone biosynthesis	3
nta00260	Glycine, serine and threonine metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00260	Glycine, serine and threonine metabolism	3
osa00670	One carbon pool by folate	3
osa01200	Carbon metabolism	3
osa00620	Pyruvate metabolism	3
osa01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	2
osa00531	Glycosaminoglycan degradation	2
osa04142	Lysosome	2
osa00260	Glycine, serine and threonine metabolism	2
osa00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00670	One carbon pool by folate	3
zma00240	Pyrimidine metabolism	2
zma00270	Cysteine and methionine metabolism	2
zma00470	D-Amino acid metabolism	2
zma00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00670	One carbon pool by folate	4
tae01200	Carbon metabolism	4
tae00260	Glycine, serine and threonine metabolism	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00650	Butanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00670	One carbon pool by folate	6
tae01200	Carbon metabolism	6
tae00260	Glycine, serine and threonine metabolism	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00650	Butanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	3
sbi00541	Biosynthesis of various nucleotide sugars	2
sbi00053	Ascorbate and aldarate metabolism	2
sbi00250	Alanine, aspartate and glutamate metabolism	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04146	Peroxisome	3
bdi00071	Fatty acid degradation	2
bdi00410	beta-Alanine metabolism	2
bdi00592	alpha-Linolenic acid metabolism	2
bdi00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100250859

100246770

843831

823972

100170755

100170731

103873553

103830679

7484775

7462540

11412053

25489568

107924276

107912041

125584416

106387246

102615494

100301929

101253497

102581509

102598406

107773226

107811392

4345606

4336081

606443

123139332

123145997

123401076

123426938

8075627

8057487

100845613

100826926

5724685

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	2	2	3	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100246770 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100246770 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**