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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100247646   DEAD-box ATP-dependent RNA helicase 5 
 vvi-r.5   100247646   DEAD-box ATP-dependent RNA helicase 5 
 vvi-m.5   100247646   DEAD-box ATP-dependent RNA helicase 5 
 ath-u.5   STRS1   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100806057   DEAD-box ATP-dependent RNA helicase 5 
 gma-u.5   SLTI248   DEAD-box RNA helicase 
 ppo-u.5   7456107   DEAD-box ATP-dependent RNA helicase 5 
 mtr-u.5   11409569   DEAD-box ATP-dependent RNA helicase 5 
 sly-u.5   101253217   DEAD-box ATP-dependent RNA helicase 5 
 osa-u.5   4342981   DEAD-box ATP-dependent RNA helicase 5-like 
 zma-u.5   100383160   putative DEAD-box ATP-dependent RNA helicase family protein 

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Top 50 coexpressed genes to 100247646 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247646 (vvi-u.5 coexpression data)

CoexMap"100247646"


vviLOC100247646 | Entrez gene ID : 100247646      
Species vvi ath gma ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (198 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (170 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (56 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002274688.1 [sequence] [blastp]
XP_059590664.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  E.R. 1,  nucl_plas 1  (predict for XP_002274688.1)
plas 8,  nucl 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_059590664.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002274688.1)
other 8  (predict for XP_059590664.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100247646

.
vvi-r.5
for
100247646

.
vvi-m.5
for
100247646

.
ath-u.5
for
STRS1

.
gma-u.5
for
100806057

.
gma-u.5
for
SLTI248

.
ppo-u.5
for
7456107

.
mtr-u.5
for
11409569

.
sly-u.5
for
101253217

.
osa-u.5
for
4342981

.
zma-u.5
for
100383160

.


Ortholog ID: 9245
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol STRS1 LOC100806057 SLTI248 LOC101253217 LOC4342981 LOC100383160 LOC103833681 LOC103840203 LOC100247646 LOC7456107 LOC11409569 LOC123102849 LOC123111069 LOC123452372 LOC107941389 LOC107938593 LOC106445083 LOC106435144 CHLRE_12g539100v5 LOC8057317 LOC102592140 LOC102614699 LOC100821068 LOC107794787 LOC107789804
Function* DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 5 DEAD-box RNA helicase DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5-like putative DEAD-box ATP-dependent RNA helicase family protein DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5-like DEAD-box ATP-dependent RNA helicase 5-like uncharacterized protein DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5 DEAD-box ATP-dependent RNA helicase 5-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03018 RNA degradation 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840087 100806057 100305353 101253217 4342981 100383160 103833681 103840203 100247646 7456107 11409569 123102849 123111069 123452372 107941389 107938593 106445083 106435144 5718432 8057317 102592140 102614699 100821068 107794787 107789804
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