ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100248439	lysM domain receptor-like kinase 3
vvi-r.5	100248439	lysM domain receptor-like kinase 3
vvi-m.5	100248439	lysM domain receptor-like kinase 3
vvi-u.5	100256497	lysM domain receptor-like kinase 3
vvi-u.5	100241345	lysM domain receptor-like kinase 3
ath-u.5	AT3G57120	Protein kinase superfamily protein
gma-u.5	100792694	lysM domain receptor-like kinase 3
gma-u.5	100799331	protein LYK5
gma-u.5	100809183	lysM domain receptor-like kinase 3
ppo-u.5	7479870	lysM domain receptor-like kinase 3
ppo-u.5	7491159	protein LYK5
mtr-u.5	11414164	protein LYK5
mtr-u.5	25487842	lysM domain receptor-like kinase 3
sly-u.5	101249551	lysM domain receptor-like kinase 3
sly-u.5	101264633	lysM domain receptor-like kinase 3
osa-u.5	4347922	chitin elicitor receptor kinase 1
osa-u.5	4331165	protein LYK5
zma-u.5	100280820	protein kinase APK1B

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1262 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(1297 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA

Protein

XP_002285314.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 2, mito 1

(predict for XP_002285314.3)

Subcellular
localization
TargetP

chlo 9

(predict for XP_002285314.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100248439	vvi-r.5 for 100248439	vvi-m.5 for 100248439	vvi-u.5 for 100256497	vvi-u.5 for 100241345	ath-u.5 for AT3G57120	gma-u.5 for 100792694	gma-u.5 for 100799331	gma-u.5 for 100809183	ppo-u.5 for 7479870	ppo-u.5 for 7491159	mtr-u.5 for 11414164	mtr-u.5 for 25487842	sly-u.5 for 101249551	sly-u.5 for 101264633	osa-u.5 for 4347922	osa-u.5 for 4331165	zma-u.5 for 100280820

Ortholog

Ortholog ID: 3704

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*

lysM domain receptor-like kinase 3

Protein kinase superfamily protein

protein LYK5

lysM domain receptor-like kinase 3

protein LYK5

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1

protein LYK5

protein kinase APK1B

putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230

lysM domain receptor-like kinase 3

chitin elicitor receptor kinase 1

protein LYK5-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3
ath04130	SNARE interactions in vesicular transport	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03420	Nucleotide excision repair	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04142	Lysosome	3
cit04141	Protein processing in endoplasmic reticulum	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00740	Riboflavin metabolism	2
hvu01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100248439

100241345

824879

100799331

100792694

103841619

7479870

11414164

25487842

107904269

107936013

106445913

102617130

102631393

101249551

101264633

102582283

102580283

107809050

107788571

4347922

4331165

100280820

123446790

123402623

8059691

8070777

100834663

100837790

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100248439 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100248439 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	3	2	2	2	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100248439 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100248439 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**