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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258599   gibberellin 2-beta-dioxygenase 2 
 ath-u.5   GA2OX6   gibberellin 2-oxidase 6 
 gma-u.5   GA2OX2   gibberellin 2-beta-dioxygenase 2 
 mtr-u.5   25494132   gibberellin 2-beta-dioxygenase 2 
 mtr-u.5   11416786   gibberellin 2-beta-dioxygenase 2 
 sly-u.5   101261151   gibberellin 2-beta-dioxygenase 2-like 
 sly-u.5   GA2ox3   gibberellin 2-oxidase 
 osa-u.5   9266994   gibberellin 2-beta-dioxygenase 2-like 
 zma-u.5   100285694   gibberellin 2-oxidase 

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Top 50 coexpressed genes to 100258599 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258599 (vvi-u.5 coexpression data)

CoexMap"100248676"


vviLOC100248676 | Entrez gene ID : 100248676      
Species vvi ath gma mtr sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 1 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00904 [list] [network] Diterpenoid biosynthesis (25 genes)
GO BP
GO:0045487 [list] [network] gibberellin catabolic process  (5 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (103 genes)  IEA  
GO CC
GO MF
Protein XP_002272155.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  plas 1,  extr 1  (predict for XP_002272155.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_002272155.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258599
ath-u.5
for
GA2OX6
gma-u.5
for
GA2OX2
mtr-u.5
for
25494132
mtr-u.5
for
11416786
sly-u.5
for
101261151
sly-u.5
for
GA2ox3
osa-u.5
for
9266994
zma-u.5
for
100285694


Ortholog ID: 1998
Species vvi ath gma bra bra ppo mtr ghi ghi bna bna cit cit sly sly sot nta nta osa hvu sbi bdi
Symbol LOC100258599 GA2OX6 GA2OX2 LOC103868699 LOC103844588 LOC7460479 LOC25494132 LOC107917072 LOC107946018 LOC106401876 LOC125595226 LOC102630592 LOC102614515 LOC101261151 GA2ox3 LOC102592578 LOC107758914 LOC107794008 LOC9266994 LOC123409385 LOC8080913 LOC100841118
Function* gibberellin 2-beta-dioxygenase 2 gibberellin 2-oxidase 6 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 4 gibberellin 2-beta-dioxygenase 6 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 6-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2-like gibberellin 2-oxidase gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2-like gibberellin 2-beta-dioxygenase 2 gibberellin 2-beta-dioxygenase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00905 Brassinosteroid biosynthesis 4
ghi04142 Lysosome 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00270 Cysteine and methionine metabolism 2
osa00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258599 839508 100779525 103868699 103844588 7460479 25494132 107917072 107946018 106401876 125595226 102630592 102614515 101261151 100134888 102592578 107758914 107794008 9266994 123409385 8080913 100841118
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