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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100249166   NADP-dependent malic enzyme 
 vvi-r.5   100249166   NADP-dependent malic enzyme 
 vvi-u.5   NADP-ME   malate dehydrogenase (NADP+) 
 vvi-u.5   VVME2   malic enzyme 
 ath-u.5   NADP-ME1   NADP-malic enzyme 1 
 ath-u.5   NADP-ME2   NADP-malic enzyme 2 
 gma-u.5   100818219   NADP-dependent malic enzyme 
 gma-u.5   100804607   NADP-dependent malic enzyme 
 gma-u.5   100801564   NADP-dependent malic enzyme 
 ppo-u.5   7476690   NADP-dependent malic enzyme 
 ppo-u.5   7461559   NADP-dependent malic enzyme-like 
 mtr-u.5   25490143   NADP-dependent malic enzyme 
 mtr-u.5   11412374   NADP-dependent malic enzyme 
 mtr-u.5   11434761   NADP-dependent malic enzyme 
 sly-u.5   101255777   NADP-dependent malic enzyme, chloroplastic 
 sly-u.5   101258131   NADP-dependent malic enzyme 
 sly-u.5   ME2   cytosolic NADP-malic enzyme 
 osa-u.5   4324717   NADP-dependent malic enzyme 
 osa-u.5   4326769   NADP-dependent malic enzyme, chloroplastic-like 
 zma-u.5   109939197   NADP-dependent malic enzyme, chloroplastic 
 zma-u.5   103635691   NADP-dependent malic enzyme, chloroplastic 
 zma-u.5   100286036   uncharacterized LOC100286036 

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Top 50 coexpressed genes to 100249166 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100249166 (vvi-u.5 coexpression data)

CoexMap"100249166"


vviLOC100249166 | Entrez gene ID : 100249166      
Species vvi ath gma ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00620 [list] [network] Pyruvate metabolism (103 genes)
vvi00710 [list] [network] Carbon fixation by Calvin cycle (63 genes)
vvi01200 [list] [network] Carbon metabolism (253 genes)
GO BP
GO:0006108 [list] [network] malate metabolic process  (17 genes)  IEA  
GO:0006090 [list] [network] pyruvate metabolic process  (66 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0004473 [list] [network] malate dehydrogenase (decarboxylating) (NADP+) activity  (3 genes)  IEA  
GO:0004471 [list] [network] malate dehydrogenase (decarboxylating) (NAD+) activity  (5 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (70 genes)  IEA  
Protein XP_003631773.1 [sequence] [blastp]
XP_010648278.1 [sequence] [blastp]
XP_059592101.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  E.R. 2,  nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_003631773.1)
chlo 4,  vacu 2,  E.R. 2,  E.R._vacu 2  (predict for XP_010648278.1)
cyto 5,  E.R. 2,  nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_059592101.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003631773.1)
mito 6  (predict for XP_010648278.1)
other 9  (predict for XP_059592101.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100249166

.
vvi-r.5
for
100249166

.
vvi-u.5
for
NADP-ME

.
vvi-u.5
for
VVME2

.
ath-u.5
for
NADP-ME1

.
ath-u.5
for
NADP-ME2

.
gma-u.5
for
100818219

.
gma-u.5
for
100804607

.
gma-u.5
for
100801564

.
ppo-u.5
for
7476690

.
ppo-u.5
for
7461559

.
mtr-u.5
for
25490143

.
mtr-u.5
for
11412374

.
mtr-u.5
for
11434761

.
sly-u.5
for
101255777

.
sly-u.5
for
101258131

.
sly-u.5
for
ME2

.
osa-u.5
for
4324717

.
osa-u.5
for
4326769

.
zma-u.5
for
109939197

.
zma-u.5
for
103635691

.
zma-u.5
for
100286036

.


Ortholog ID: 741
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol NADP-ME4 NADP-ME2 LOC100782096 LOC100801564 ME2 LOC101255777 LOC4338007 LOC4324717 LOC542209 LOC542233 LOC103850789 LOC103828269 LOC100249166 VVME2 LOC7470734 LOC11434761 LOC11412374 LOC123062027 LOC123070746 LOC123444313 LOC123444382 LOC107897092 LOC107897353 LOC106348556 LOC106357581 CHLRE_06g251400v5 CHLRE_14g629700v5 LOC8075558 LOC8065884 LOC102603300 LOC102578500 LOC102577988 LOC102626397 LOC100832025 LOC100833074 LOC107804419 LOC107778847
Function* NADP-malic enzyme 4 NADP-malic enzyme 2 NADP-dependent malic enzyme NADP-dependent malic enzyme cytosolic NADP-malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic-like NADP-dependent malic enzyme NADP malic enzyme 4 NADP malic enzyme 3 NADP-dependent malic enzyme 2 NADP-dependent malic enzyme 1 NADP-dependent malic enzyme malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme-like NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme 3 NADP-dependent malic enzyme 1 uncharacterized protein uncharacterized protein NADP-dependent malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme NADP-dependent malic enzyme NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme, chloroplastic NADP-dependent malic enzyme-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 10
ath01200 Carbon metabolism 10
ath00010 Glycolysis / Gluconeogenesis 7
ath00020 Citrate cycle (TCA cycle) 5
ath00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites 2
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma00620 Pyruvate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 3
gma00941 Flavonoid biosynthesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00010 Glycolysis / Gluconeogenesis 4
osa00620 Pyruvate metabolism 4
osa01230 Biosynthesis of amino acids 4
osa00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 5
osa00480 Glutathione metabolism 3
osa00030 Pentose phosphate pathway 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00710 Carbon fixation by Calvin cycle 6
zma00620 Pyruvate metabolism 5
zma00010 Glycolysis / Gluconeogenesis 4
zma00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00480 Glutathione metabolism 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
mtr00620 Pyruvate metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
ghi04626 Plant-pathogen interaction 5
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre00710 Carbon fixation by Calvin cycle 3
cre01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi00030 Pentose phosphate pathway 3
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 4
sot01200 Carbon metabolism 3
sot00620 Pyruvate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot04145 Phagosome 4
sot04148 Efferocytosis 3
sot03060 Protein export 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 3
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 2
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844314 831039 100782096 100801564 543522 101255777 4338007 4324717 542209 542233 103850789 103828269 100249166 100233075 7470734 11434761 11412374 123062027 123070746 123444313 123444382 107897092 107897353 106348556 106357581 5722193 5718362 8075558 8065884 102603300 102578500 102577988 102626397 100832025 100833074 107804419 107778847
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