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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250252   uncharacterized LOC100250252 
 vvi-r.5   100250252   uncharacterized LOC100250252 
 vvi-m.5   100250252   uncharacterized LOC100250252 
 ath-u.5   AT5G55100   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 gma-u.5   100801276   splicing factor, suppressor of white-apricot homolog 
 gma-u.5   100791165   splicing factor, suppressor of white-apricot homolog 
 ppo-u.5   7478709   uncharacterized LOC7478709 
 mtr-u.5   11425876   protein suppressor of white apricot 
 sly-u.5   101250744   uncharacterized LOC101250744 
 osa-u.5   4325296   uncharacterized LOC4325296 
 zma-u.5   100383427   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 

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Top 50 coexpressed genes to 100250252 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250252 (vvi-u.5 coexpression data)

CoexMap"100250252"


vviLOC100250252 | Entrez gene ID : 100250252      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000395 [list] [network] mRNA 5'-splice site recognition  (4 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (548 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002278970.1 [sequence] [blastp]
XP_010644480.1 [sequence] [blastp]
XP_010644482.1 [sequence] [blastp]
XP_019072731.1 [sequence] [blastp]
XP_059591643.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002278970.1)
nucl 9  (predict for XP_010644480.1)
nucl 9  (predict for XP_010644482.1)
nucl 9  (predict for XP_019072731.1)
nucl 9  (predict for XP_059591643.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002278970.1)
other 3  (predict for XP_010644480.1)
other 3  (predict for XP_010644482.1)
other 6,  mito 4  (predict for XP_019072731.1)
other 6,  mito 4  (predict for XP_059591643.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250252
vvi-r.5
for
100250252
vvi-m.5
for
100250252
ath-u.5
for
AT5G55100
gma-u.5
for
100801276
gma-u.5
for
100791165
ppo-u.5
for
7478709
mtr-u.5
for
11425876
sly-u.5
for
101250744
osa-u.5
for
4325296
zma-u.5
for
100383427


Ortholog ID: 10398
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100250252 AT5G55100 LOC100791165 LOC100801276 LOC103851906 LOC7478709 LOC11425876 LOC107932757 LOC107903459 LOC125581532 LOC106390010 LOC102619096 LOC101250744 LOC102593692 LOC142182631 LOC107786983 LOC4325296 LOC100383427 LOC123070467 LOC123061788 LOC123444207 LOC8068064 LOC100831732 CHLRE_11g481700v5
Function* uncharacterized LOC100250252 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog uncharacterized LOC7478709 protein suppressor of white apricot protein suppressor of white apricot splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog uncharacterized LOC102619096 uncharacterized LOC101250744 splicing factor, suppressor of white-apricot homolog uncharacterized LOC142182631 uncharacterized LOC107786983 uncharacterized LOC4325296 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein uncharacterized LOC123070467 NKAP family protein UM04995 splicing factor, suppressor of white-apricot homolog splicing factor, suppressor of white-apricot homolog uncharacterized LOC100831732 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 5
bna04070 Phosphatidylinositol signaling system 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250252 835601 100791165 100801276 103851906 7478709 11425876 107932757 107903459 125581532 106390010 102619096 101250744 102593692 142182631 107786983 4325296 100383427 123070467 123061788 123444207 8068064 100831732 5722947
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