ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100250729	uncharacterized LOC100250729
vvi-r.5	100250729	uncharacterized LOC100250729
vvi-m.5	100250729	uncharacterized LOC100250729
vvi-u.5	100242710	uncharacterized LOC100242710
ath-u.5	AT1G42960	inner membrane localized protein
gma-u.5	100791540	uncharacterized LOC100791540
gma-u.5	100786309	uncharacterized LOC100786309
gma-u.5	100527765	uncharacterized LOC100527765
bra-r.6	103833306	uncharacterized LOC103833306
ppo-u.5	7494713	uncharacterized LOC7494713
ppo-u.5	7462581	uncharacterized LOC7462581
mtr-u.5	11418213	uncharacterized LOC11418213
mtr-u.5	11408591	uncharacterized LOC11408591
ghi-r.1	107910298	uncharacterized LOC107910298
ghi-r.1	107892532	uncharacterized LOC107892532
ghi-r.1	107916683	uncharacterized LOC107916683
bna-r.1	106361260	uncharacterized LOC106361260
bna-r.1	106405504	uncharacterized LOC106405504
cit-r.1	102626973	hypothetical protein
sly-u.5	101264321	uncharacterized LOC101264321
sly-u.5	101249717	uncharacterized LOC101249717
sot-r.1	102605586	uncharacterized LOC102605586
sot-r.1	102578172	uncharacterized LOC102578172
nta-r.1	107830867	uncharacterized LOC107830867
nta-r.1	107801159	uncharacterized LOC107801159
nta-r.1	107796677	uncharacterized LOC107796677
cre-r.1	CHLRE_06g278195v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009706 [list] [network] chloroplast inner membrane	(14 genes)	IEA
GO:0009535 [list] [network] chloroplast thylakoid membrane	(82 genes)	IEA

GO MF

Protein

XP_002276709.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for XP_002276709.1)

Subcellular
localization
TargetP

chlo 6, mito 3

(predict for XP_002276709.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100250729	vvi-r.5 for 100250729	vvi-m.5 for 100250729	vvi-u.5 for 100242710	ath-u.5 for AT1G42960	gma-u.5 for 100791540	gma-u.5 for 100786309	gma-u.5 for 100527765	bra-r.6 for 103833306	ppo-u.5 for 7494713	ppo-u.5 for 7462581	mtr-u.5 for 11418213	mtr-u.5 for 11408591	ghi-r.1 for 107910298	ghi-r.1 for 107892532	ghi-r.1 for 107916683	bna-r.1 for 106361260	bna-r.1 for 106405504	cit-r.1 for 102626973	sly-u.5 for 101264321	sly-u.5 for 101249717	sot-r.1 for 102605586	sot-r.1 for 102578172	nta-r.1 for 107830867	nta-r.1 for 107801159	nta-r.1 for 107796677	cre-r.1 for CHLRE_06g278195v5

Ortholog

Ortholog ID: 8276

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

cre

Symbol

Function^*

uncharacterized LOC100250729

uncharacterized LOC100242710

inner membrane localized protein

uncharacterized LOC100786309

uncharacterized LOC100527765

uncharacterized LOC100306344

uncharacterized LOC103833306

uncharacterized LOC7494713

uncharacterized LOC7462581

uncharacterized LOC11418213

uncharacterized LOC11408591

uncharacterized LOC107892532

uncharacterized LOC107916683

uncharacterized LOC107922460

uncharacterized LOC106361260

uncharacterized LOC106405504

hypothetical protein

uncharacterized LOC101264321

uncharacterized LOC101249717

uncharacterized LOC102605586

uncharacterized LOC102578172

uncharacterized LOC107830867

uncharacterized LOC107801159

uncharacterized LOC107767302

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00061	Fatty acid biosynthesis	6
vvi01212	Fatty acid metabolism	5
vvi01240	Biosynthesis of cofactors	4
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	7
ath00061	Fatty acid biosynthesis	6
ath01212	Fatty acid metabolism	6
ath00780	Biotin metabolism	5
ath00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00061	Fatty acid biosynthesis	4
gma01212	Fatty acid metabolism	4
gma00620	Pyruvate metabolism	3
gma01200	Carbon metabolism	3
gma00780	Biotin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	2
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	5
ppo00053	Ascorbate and aldarate metabolism	2
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04144	Endocytosis	2
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	5
ghi01200	Carbon metabolism	5
ghi01230	Biosynthesis of amino acids	5
ghi00260	Glycine, serine and threonine metabolism	4
ghi01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	5
ghi01200	Carbon metabolism	5
ghi01230	Biosynthesis of amino acids	5
ghi00260	Glycine, serine and threonine metabolism	4
ghi01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00730	Thiamine metabolism	2
bna01232	Nucleotide metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly00620	Pyruvate metabolism	3
sly01200	Carbon metabolism	3
sly00010	Glycolysis / Gluconeogenesis	2
sly00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00900	Terpenoid backbone biosynthesis	2
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot01230	Biosynthesis of amino acids	3
sot00860	Porphyrin metabolism	3
sot00061	Fatty acid biosynthesis	2
sot01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	3
nta00240	Pyrimidine metabolism	3
nta01240	Biosynthesis of cofactors	3
nta00190	Oxidative phosphorylation	2
nta00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00620	Pyruvate metabolism	7
cre01200	Carbon metabolism	7
cre00061	Fatty acid biosynthesis	6
cre01212	Fatty acid metabolism	6
cre00010	Glycolysis / Gluconeogenesis	4

Expression

Expression pattern

Entrez Gene ID^*

100250729

100242710

840894

100786309

100527765

100306344

103833306

7494713

7462581

11418213

11408591

107892532

107916683

107922460

106361260

106405504

102626973

101264321

101249717

102605586

102578172

107830867

107801159

107767302

5723637

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100250729 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100250729 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	cre	bdi	osa	tae	zma	sbi	hvu
Paralog	4	1	3	1	2	2	3	2	1	2	2	3	1	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100250729 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100250729 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**