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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AMS   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103846021   transcription factor ABORTED MICROSPORES 
 ghi-r.1   107932461   transcription factor ABORTED MICROSPORES 
 ghi-r.1   107945067   transcription factor ABORTED MICROSPORES 
 bna-r.1   106439826   transcription factor ABORTED MICROSPORES-like 
 bna-r.1   106428702   transcription factor ABORTED MICROSPORES 
 bna-r.1   111197876   transcription factor ABORTED MICROSPORES 
 cit-r.1   102611911   transcription factor ABORTED MICROSPORES 
 sly-u.5   101253608   transcription factor ABORTED MICROSPORES 
 sot-r.1   102598182   transcription factor ABORTED MICROSPORES 
 zma-u.5   100274330   uncharacterized LOC100274330 
 tae-r.2   123130208   transcription factor TDR 
 tae-r.2   123133550   transcription factor TDR 
 bdi-r.1   100844277   transcription factor TDR 
 bdi-r.1   100843665   transcription factor TDR 

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Top 50 coexpressed genes to AMS (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AMS (ath-u.5 coexpression data)

CoexMap"100251619"


vviLOC100251619 | Entrez gene ID : 100251619      
Species ath bra ghi bna cit sly sot zma tae bdi vvi nta sbi cre gma osa ppo hvu mtr
Paralog 1 1 2 3 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (449 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (598 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002263966.2 [sequence] [blastp]
XP_010651162.1 [sequence] [blastp]
XP_019075824.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002263966.2)
nucl 9  (predict for XP_010651162.1)
nucl 9  (predict for XP_019075824.1)
Subcellular
localization
TargetP
scret 7,  other 4  (predict for XP_002263966.2)
other 8  (predict for XP_010651162.1)
other 8  (predict for XP_019075824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AMS
bra-r.6
for
103846021
ghi-r.1
for
107932461
ghi-r.1
for
107945067
bna-r.1
for
106439826
bna-r.1
for
106428702
bna-r.1
for
111197876
cit-r.1
for
102611911
sly-u.5
for
101253608
sot-r.1
for
102598182
zma-u.5
for
100274330
tae-r.2
for
123130208
tae-r.2
for
123133550
bdi-r.1
for
100844277
bdi-r.1
for
100843665


Ortholog ID: 6490
Species ath bra ghi ghi bna bna bna cit sly sot zma tae tae tae bdi bdi
Symbol AMS LOC103846021 LOC107932461 LOC107945067 LOC106439826 LOC106428702 LOC106418318 LOC102611911 LOC101253608 LOC102598182 LOC100274330 LOC123130208 LOC123133550 LOC123130206 LOC100844277 LOC100843665
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES-like transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES transcription factor ABORTED MICROSPORES uncharacterized LOC100274330 transcription factor TDR transcription factor TDR transcription factor TDR transcription factor TDR transcription factor TDR
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 3
bra00941 Flavonoid biosynthesis 2
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00040 Pentose and glucuronate interconversions 2
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00040 Pentose and glucuronate interconversions 2
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816194 103846021 107932461 107945067 106439826 106428702 106418318 102611911 101253608 102598182 100274330 123130208 123133550 123130206 100844277 100843665
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