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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100251843   protein PTST homolog 2, chloroplastic 
 vvi-r.5   100251843   protein PTST homolog 2, chloroplastic 
 vvi-m.5   100251843   protein PTST homolog 2, chloroplastic 
 ath-u.5   AT1G27070   5'-AMP-activated protein kinase-like protein 
 gma-u.5   100792611   protein PTST homolog 2, chloroplastic 
 gma-u.5   100814629   protein PTST homolog 2, chloroplastic 
 bra-r.6   103840678   protein PTST homolog 2, chloroplastic 
 ppo-u.5   18102348   protein PTST homolog 2, chloroplastic 
 ppo-u.5   7469078   protein PTST homolog 2, chloroplastic 
 mtr-u.5   11420096   protein PTST homolog 2, chloroplastic 
 ghi-r.1   107886645   protein PTST homolog 2, chloroplastic 
 ghi-r.1   107909583   protein PTST homolog 2, chloroplastic 
 bna-r.1   111197768   protein PTST homolog 2, chloroplastic-like 
 bna-r.1   106399217   protein PTST homolog 2, chloroplastic-like 
 cit-r.1   102617980   protein PTST homolog 2, chloroplastic 
 sly-u.5   101255617   protein PTST homolog 2, chloroplastic 
 sly-u.5   101254994   protein PTST homolog 2, chloroplastic 
 sot-r.1   102605406   uncharacterized LOC102605406 
 sot-r.1   102595795   uncharacterized LOC102595795 
 nta-r.1   142161625   protein PTST homolog 2, chloroplastic-like 
 nta-r.1   107786028   protein PTST homolog 2, chloroplastic 
 nta-r.1   107767607   protein PTST homolog 2, chloroplastic 
 osa-u.5   4333759   Protein FLOURY ENDOSPERM 6, chloroplastic 
 zma-u.5   103643820   5'-AMP-activated protein kinase-related 
 zma-u.5   103625980   protein FLOURY ENDOSPERM 6, chloroplastic 
 tae-r.2   123090713   protein FLOURY ENDOSPERM 6, chloroplastic 
 tae-r.2   123087251   protein FLOURY ENDOSPERM 6, chloroplastic 
 tae-r.2   123095719   protein FLOURY ENDOSPERM 6, chloroplastic 
 hvu-r.1   123447184   protein FLOURY ENDOSPERM 6, chloroplastic-like 
 sbi-r.1   8067264   uncharacterized LOC8067264 
 bdi-r.1   100823517   protein FLOURY ENDOSPERM 6, chloroplastic 

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Top 50 coexpressed genes to 100251843 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100251843 (vvi-u.5 coexpression data)

CoexMap"100251843"


vviLOC100251843 | Entrez gene ID : 100251843      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 2 2 1 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002269528.1 [sequence] [blastp]
XP_010652524.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_002269528.1)
chlo 9,  chlo_mito 5  (predict for XP_010652524.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_002269528.1)
chlo 3  (predict for XP_010652524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100251843
vvi-r.5
for
100251843
vvi-m.5
for
100251843
ath-u.5
for
AT1G27070
gma-u.5
for
100792611
gma-u.5
for
100814629
bra-r.6
for
103840678
ppo-u.5
for
18102348
ppo-u.5
for
7469078
mtr-u.5
for
11420096
ghi-r.1
for
107886645
ghi-r.1
for
107909583
bna-r.1
for
111197768
bna-r.1
for
106399217
cit-r.1
for
102617980
sly-u.5
for
101255617
sly-u.5
for
101254994
sot-r.1
for
102605406
sot-r.1
for
102595795
nta-r.1
for
142161625
nta-r.1
for
107786028
nta-r.1
for
107767607
osa-u.5
for
4333759
zma-u.5
for
103643820
zma-u.5
for
103625980
tae-r.2
for
123090713
tae-r.2
for
123087251
tae-r.2
for
123095719
hvu-r.1
for
123447184
sbi-r.1
for
8067264
bdi-r.1
for
100823517


Ortholog ID: 7434
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna bna cit sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100251843 AT1G27070 LOC100792611 LOC100814629 LOC103840678 LOC18102348 LOC7469078 LOC11420096 LOC107886645 LOC107909583 LOC111197768 LOC106399217 LOC102617980 LOC101255617 LOC101254994 LOC102605406 LOC102595795 LOC107786028 LOC107767607 LOC107763737 LOC4333759 LOC103643820 LOC103625980 LOC123090713 LOC123087251 LOC123095719 LOC123447184 LOC8067264 LOC100823517
Function* protein PTST homolog 2, chloroplastic 5'-AMP-activated protein kinase-like protein protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic-like protein PTST homolog 2, chloroplastic-like protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic uncharacterized LOC102605406 uncharacterized LOC102595795 protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic protein PTST homolog 2, chloroplastic Protein FLOURY ENDOSPERM 6, chloroplastic 5'-AMP-activated protein kinase-related protein FLOURY ENDOSPERM 6, chloroplastic protein FLOURY ENDOSPERM 6, chloroplastic protein FLOURY ENDOSPERM 6, chloroplastic protein FLOURY ENDOSPERM 6, chloroplastic protein FLOURY ENDOSPERM 6, chloroplastic-like uncharacterized LOC8067264 protein FLOURY ENDOSPERM 6, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 4
bna00564 Glycerophospholipid metabolism 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00561 Glycerolipid metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00760 Nicotinate and nicotinamide metabolism 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta00230 Purine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 4
osa00020 Citrate cycle (TCA cycle) 4
osa00620 Pyruvate metabolism 4
osa00785 Lipoic acid metabolism 4
osa01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00030 Pentose phosphate pathway 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04712 Circadian rhythm - plant 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 5
tae04120 Ubiquitin mediated proteolysis 2
tae00061 Fatty acid biosynthesis 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00620 Pyruvate metabolism 3
sbi00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00230 Purine metabolism 2
bdi04075 Plant hormone signal transduction 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100251843 839596 100792611 100814629 103840678 18102348 7469078 11420096 107886645 107909583 111197768 106399217 102617980 101255617 101254994 102605406 102595795 107786028 107767607 107763737 4333759 103643820 103625980 123090713 123087251 123095719 123447184 8067264 100823517
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