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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252439   red chlorophyll catabolite reductase 
 vvi-r.5   100252439   red chlorophyll catabolite reductase 
 vvi-m.5   100252439   red chlorophyll catabolite reductase 
 ath-u.5   ACD2   accelerated cell death 2 (ACD2) 
 gma-u.5   100780934   red chlorophyll catabolite reductase, chloroplastic-like 
 gma-u.5   100777640   red chlorophyll catabolite reductase, chloroplastic-like 
 bra-r.6   103862886   red chlorophyll catabolite reductase, chloroplastic 
 ppo-u.5   7483116   red chlorophyll catabolite reductase, chloroplastic 
 ppo-u.5   7462586   red chlorophyll catabolite reductase 
 mtr-u.5   11442328   red chlorophyll catabolite reductase, chloroplastic 
 ghi-r.1   107897716   caltractin 
 ghi-r.1   107913254   red chlorophyll catabolite reductase 
 bna-r.1   111202026   red chlorophyll catabolite reductase, chloroplastic 
 cit-r.1   102622999   red chlorophyll catabolite reductase, chloroplastic 
 cit-r.1   102623285   red chlorophyll catabolite reductase-like 
 sly-u.5   778267   red chlorophyll catabolite reductase, chloroplastic 
 sot-r.1   102591737   red chlorophyll catabolite reductase, chloroplastic-like 
 nta-r.1   107825518   red chlorophyll catabolite reductase, chloroplastic-like 
 nta-r.1   107810967   red chlorophyll catabolite reductase, chloroplastic 
 osa-u.5   107277220   red chlorophyll catabolite reductase 
 osa-u.5   4348519   red chlorophyll catabolite reductase 
 zma-u.5   100272914   Red chlorophyll catabolite reductase chloroplastic 
 tae-r.2   123156544   red chlorophyll catabolite reductase 1, chloroplastic 
 tae-r.2   123164229   red chlorophyll catabolite reductase 1, chloroplastic 
 hvu-r.1   123409494   red chlorophyll catabolite reductase 
 sbi-r.1   8062831   red chlorophyll catabolite reductase 
 sbi-r.1   8068743   red chlorophyll catabolite reductase 
 sbi-r.1   8079617   red chlorophyll catabolite reductase 
 bdi-r.1   100843855   red chlorophyll catabolite reductase 

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Top 50 coexpressed genes to 100252439 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252439 (vvi-u.5 coexpression data)

CoexMap"100252439"


vviLOC100252439 | Entrez gene ID : 100252439      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 1 2 1 2 1 1 2 2 1 2 1 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00860 [list] [network] Porphyrin metabolism (52 genes)
GO BP
GO:0015996 [list] [network] chlorophyll catabolic process  (9 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (557 genes)  IEA  
GO MF
GO:0051743 [list] [network] red chlorophyll catabolite reductase activity  (1 genes)  IEA  
Protein XP_002277744.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_002277744.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002277744.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252439
vvi-r.5
for
100252439
vvi-m.5
for
100252439
ath-u.5
for
ACD2
gma-u.5
for
100780934
gma-u.5
for
100777640
bra-r.6
for
103862886
ppo-u.5
for
7483116
ppo-u.5
for
7462586
mtr-u.5
for
11442328
ghi-r.1
for
107897716
ghi-r.1
for
107913254
bna-r.1
for
111202026
cit-r.1
for
102622999
cit-r.1
for
102623285
sly-u.5
for
778267
sot-r.1
for
102591737
nta-r.1
for
107825518
nta-r.1
for
107810967
osa-u.5
for
107277220
osa-u.5
for
4348519
zma-u.5
for
100272914
tae-r.2
for
123156544
tae-r.2
for
123164229
hvu-r.1
for
123409494
sbi-r.1
for
8062831
sbi-r.1
for
8068743
sbi-r.1
for
8079617
bdi-r.1
for
100843855


Ortholog ID: 6331
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna cit cit sly sot nta nta osa osa zma tae hvu sbi sbi sbi bdi
Symbol LOC100252439 ACD2 LOC100780934 LOC100777640 LOC103862886 LOC7483116 LOC7462586 LOC11442328 LOC107897716 LOC107913254 LOC111202026 LOC102622999 LOC102623285 LOC778267 LOC102591737 LOC107825518 LOC107810967 LOC107277220 LOC4348519 LOC100272914 LOC123142922 LOC123409494 LOC8062831 LOC8068743 LOC8079617 LOC100843855
Function* red chlorophyll catabolite reductase accelerated cell death 2 (ACD2) red chlorophyll catabolite reductase, chloroplastic-like red chlorophyll catabolite reductase, chloroplastic-like red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase red chlorophyll catabolite reductase, chloroplastic caltractin red chlorophyll catabolite reductase red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase-like red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase, chloroplastic-like red chlorophyll catabolite reductase, chloroplastic-like red chlorophyll catabolite reductase, chloroplastic red chlorophyll catabolite reductase red chlorophyll catabolite reductase Red chlorophyll catabolite reductase chloroplastic red chlorophyll catabolite reductase red chlorophyll catabolite reductase red chlorophyll catabolite reductase red chlorophyll catabolite reductase red chlorophyll catabolite reductase red chlorophyll catabolite reductase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 2
gma00860 Porphyrin metabolism 2
gma04142 Lysosome 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00730 Thiamine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 4
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 5
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00330 Arginine and proline metabolism 3
nta00260 Glycine, serine and threonine metabolism 3
nta00310 Lysine degradation 3
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00330 Arginine and proline metabolism 3
nta00260 Glycine, serine and threonine metabolism 3
nta00310 Lysine degradation 3
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 4
osa00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 4
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi00860 Porphyrin metabolism 2
sbi00460 Cyanoamino acid metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 4
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi00860 Porphyrin metabolism 2
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252439 829854 100780934 100777640 103862886 7483116 7462586 11442328 107897716 107913254 111202026 102622999 102623285 778267 102591737 107825518 107810967 107277220 4348519 100272914 123142922 123409494 8062831 8068743 8079617 100843855
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