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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252571   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 vvi-r.5   100252571   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 vvi-m.5   100252571   E3 ubiquitin ligase PARAQUAT TOLERANCE 3 
 sly-u.5   101268302   E3 ubiquitin ligase PQT3-like 

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Top 50 coexpressed genes to 100252571 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252571 (vvi-u.5 coexpression data)

CoexMap"100252571"


vviLOC100252571 | Entrez gene ID : 100252571      
Species vvi sly bdi bra gma ath ppo sbi ghi sot nta cre tae zma mtr hvu cit bna osa
Paralog 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (186 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (244 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (166 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3261 genes)  IEA  
Protein XP_010648378.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_010648378.1)
Subcellular
localization
TargetP
other 5  (predict for XP_010648378.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252571
vvi-r.5
for
100252571
vvi-m.5
for
100252571
sly-u.5
for
101268302


Ortholog ID: 16185
Species vvi ghi ghi cit sly sot nta tae bdi
Symbol LOC100252571 LOC107942927 LOC107901011 LOC102613848 LOC101268302 LOC102580976 LOC107791886 LOC123097024 LOC100839326
Function* E3 ubiquitin ligase PARAQUAT TOLERANCE 3 E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin ligase PQT3-like E3 ubiquitin-protein ligase RBBP6-like uncharacterized LOC107791886 E3 ubiquitin ligase PQT3-like E3 ubiquitin-protein ligase RBBP6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252571 107942927 107901011 102613848 101268302 102580976 107791886 123097024 100839326
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