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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100252938   lysine-specific demethylase JMJ18 
 vvi-r.5   100252938   lysine-specific demethylase JMJ18 
 vvi-u.5   100243365   putative lysine-specific demethylase JMJ16 
 vvi-u.5   100249688   putative lysine-specific demethylase JMJ16 
 ath-u.5   MEE27   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   AT2G38950   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   JMJ14   JUMONJI 14 
 gma-u.5   100809262   putative lysine-specific demethylase JMJ16 
 gma-u.5   100784581   lysine-specific demethylase JMJ18 
 gma-u.5   100804864   putative lysine-specific demethylase JMJ16 
 ppo-u.5   18095778   lysine-specific demethylase JMJ18 
 ppo-u.5   7479746   putative lysine-specific demethylase JMJ16 
 ppo-u.5   7487182   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25484581   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25486667   lysine-specific demethylase JMJ18 
 mtr-u.5   25499272   putative lysine-specific demethylase JMJ16 
 sly-u.5   101265508   lysine-specific demethylase JMJ18 
 sly-u.5   JMJ6   lysine-specific demethylase JMJ6 
 sly-u.5   101246913   putative lysine-specific demethylase JMJ16 
 osa-u.5   4338351   lysine-specific demethylase JMJ18 
 osa-u.5   4338043   lysine-specific demethylase JMJ703-like 
 zma-u.5   103654141   lysine-specific demethylase JMJ703 
 zma-u.5   100383891   uncharacterized LOC100383891 
 zma-u.5   103631461   lysine-specific demethylase JMJ18 

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Top 50 coexpressed genes to 100252938 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100252938 (vvi-u.5 coexpression data)

CoexMap"100252938"


vviLOC100252938 | Entrez gene ID : 100252938      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (98 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0034647 [list] [network] histone H3K4me/H3K4me2/H3K4me3 demethylase activity  (5 genes)  IEA  
Protein XP_010655858.1 [sequence] [blastp]
XP_010655859.1 [sequence] [blastp]
XP_010655860.1 [sequence] [blastp]
XP_010655861.1 [sequence] [blastp]
XP_010655862.1 [sequence] [blastp]
XP_010655863.1 [sequence] [blastp]
XP_059596281.1 [sequence] [blastp]
XP_059596282.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_010655858.1)
nucl 9  (predict for XP_010655859.1)
nucl 9  (predict for XP_010655860.1)
nucl 9  (predict for XP_010655861.1)
nucl 10  (predict for XP_010655862.1)
nucl 10  (predict for XP_010655863.1)
nucl 10  (predict for XP_059596281.1)
nucl 10  (predict for XP_059596282.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010655858.1)
other 8  (predict for XP_010655859.1)
other 8  (predict for XP_010655860.1)
other 8  (predict for XP_010655861.1)
other 8  (predict for XP_010655862.1)
other 8  (predict for XP_010655863.1)
other 8  (predict for XP_059596281.1)
other 8  (predict for XP_059596282.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100252938
vvi-r.5
for
100252938
vvi-u.5
for
100243365
vvi-u.5
for
100249688
ath-u.5
for
MEE27
ath-u.5
for
AT2G38950
ath-u.5
for
JMJ14
gma-u.5
for
100809262
gma-u.5
for
100784581
gma-u.5
for
100804864
ppo-u.5
for
18095778
ppo-u.5
for
7479746
ppo-u.5
for
7487182
mtr-u.5
for
25484581
mtr-u.5
for
25486667
mtr-u.5
for
25499272
sly-u.5
for
101265508
sly-u.5
for
JMJ6
sly-u.5
for
101246913
osa-u.5
for
4338351
osa-u.5
for
4338043
zma-u.5
for
103654141
zma-u.5
for
100383891
zma-u.5
for
103631461


Ortholog ID: 826
Species vvi vvi ath ath gma bra ppo ppo mtr mtr ghi ghi bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC100252938 LOC100249688 PKDM7D JMJ18 LOC100804864 LOC103840300 LOC18104088 LOC18095778 LOC25484581 LOC25486667 LOC107930371 LOC107926805 LOC106411265 LOC102610903 LOC102607598 LOC101265508 JMJ6 LOC102605431 LOC102593415 LOC142177301 LOC142179375 LOC4338043 LOC4338351 LOC109939226 LOC100194382 LOC123116559 LOC123149162 LOC123427966 LOC123452400 LOC110431008 LOC8056417 LOC100826668 LOC100844367 CHLRE_05g239250v5 CHLRE_17g709550v5
Function* lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 probable inactive lysine-specific demethylase JMJ19 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ14 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ6 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ14-like putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703-like uncharacterized LOC100194382 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18-like lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00040 Pentose and glucuronate interconversions 2
sot00053 Ascorbate and aldarate metabolism 2
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00190 Oxidative phosphorylation 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100252938 100249688 837384 839963 100804864 103840300 18104088 18095778 25484581 25486667 107930371 107926805 106411265 102610903 102607598 101265508 101244589 102605431 102593415 142177301 142179375 4338043 4338351 109939226 100194382 123116559 123149162 123427966 123452400 110431008 8056417 100826668 100844367 66053412 5717153
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