ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100253027	amino acid transporter AVT1I
vvi-r.5	100253027	amino acid transporter AVT1I
vvi-m.5	100253027	amino acid transporter AVT1I
vvi-u.5	100255991	amino acid transporter AVT1I
vvi-u.5	100256814	amino acid transporter AVT1I
vvi-u.5	100854125	amino acid transporter AVT1I
ath-u.5	AT3G28960	Transmembrane amino acid transporter family protein
ath-u.5	AT5G15240	Transmembrane amino acid transporter family protein
gma-u.5	100787502	amino acid transporter AVT1I
gma-u.5	100794374	amino acid transporter AVT1I
bra-r.6	103875113	amino acid transporter AVT1I
bra-r.6	103854169	amino acid transporter AVT1I
bra-r.6	103850978	amino acid transporter AVT1J
ppo-u.5	7482478	amino acid transporter AVT1I
mtr-u.5	11410539	amino acid transporter AVT1I
mtr-u.5	11406841	amino acid transporter AVT1I
mtr-u.5	11418416	amino acid transporter AVT1I
ghi-r.1	107902231	amino acid transporter AVT1I
ghi-r.1	107892376	amino acid transporter AVT1I
ghi-r.1	107890198	amino acid transporter AVT1I
bna-r.1	125575624	amino acid transporter AVT1I-like
bna-r.1	106352342	amino acid transporter AVT1I
cit-r.1	102612989	amino acid transporter AVT1I-like
cit-r.1	102613290	amino acid transporter AVT1I-like
sly-u.5	101264793	amino acid transporter AVT1J-like
sot-r.1	107059327	vacuolar amino acid transporter 1-like
sot-r.1	107059039	amino acid transporter ANT1-like
sot-r.1	102589739	vacuolar amino acid transporter 1-like
nta-r.1	107779817	amino acid transporter AVT1J
nta-r.1	107828076	amino acid transporter AVT1J
osa-u.5	4336049	amino acid transporter AVT1I
osa-u.5	4340559	amino acid transporter AVT1I
zma-u.5	103629935	amino acid transporter AVT1I
zma-u.5	100285277	amino acid/polyamine transporter II
tae-r.2	123053542	amino acid transporter AVT1I
hvu-r.1	123426917	amino acid transporter AVT1I-like
hvu-r.1	123426915	amino acid transporter AVT1I-like
hvu-r.1	123408628	amino acid transporter AVT1I-like
sbi-r.1	8065525	vacuolar amino acid transporter 1
sbi-r.1	8073431	vacuolar amino acid transporter 1
bdi-r.1	100834390	amino acid transporter AVT1I
bdi-r.1	100822506	amino acid transporter AVT1I

Top 50 coexpressed genes to 100253027 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100253027 (vvi-u.5 coexpression data)

CoexMap"100253027"

[Cytoscape]

Annotation

functional annotation

KEGG

vvi04082 [list] [network] Neuroactive ligand signaling (16 genes)

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(987 genes)

IEA

GO MF

Protein

XP_002276455.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 3, E.R. 1, golg 1

(predict for XP_002276455.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002276455.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100253027	vvi-r.5 for 100253027	vvi-m.5 for 100253027	vvi-u.5 for 100255991	vvi-u.5 for 100256814	vvi-u.5 for 100854125	ath-u.5 for AT3G28960	ath-u.5 for AT5G15240	gma-u.5 for 100787502	gma-u.5 for 100794374	bra-r.6 for 103875113	bra-r.6 for 103854169	bra-r.6 for 103850978	ppo-u.5 for 7482478	mtr-u.5 for 11410539	mtr-u.5 for 11406841	mtr-u.5 for 11418416	ghi-r.1 for 107902231	ghi-r.1 for 107892376	ghi-r.1 for 107890198	bna-r.1 for 125575624	bna-r.1 for 106352342	cit-r.1 for 102612989	cit-r.1 for 102613290	sly-u.5 for 101264793	sot-r.1 for 107059327	sot-r.1 for 107059039	sot-r.1 for 102589739	nta-r.1 for 107779817	nta-r.1 for 107828076	osa-u.5 for 4336049	osa-u.5 for 4340559	zma-u.5 for 103629935	zma-u.5 for 100285277	tae-r.2 for 123053542	hvu-r.1 for 123426917	hvu-r.1 for 123426915	hvu-r.1 for 123408628	sbi-r.1 for 8065525	sbi-r.1 for 8073431	bdi-r.1 for 100834390	bdi-r.1 for 100822506

Ortholog

Ortholog ID: 991

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

amino acid transporter AVT1I

Transmembrane amino acid transporter family protein

amino acid transporter AVT1I

amino acid transporter AVT1J

amino acid transporter AVT1I

amino acid transporter AVT1I-like

amino acid transporter AVT1J-like

vacuolar amino acid transporter 1-like

amino acid transporter AVT1J

amino acid transporter AVT1I-like

amino acid transporter AVT1I

amino acid/polyamine transporter II

amino acid transporter AVT1I

amino acid transporter AVT1I-like

vacuolar amino acid transporter 1

amino acid transporter AVT1I

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04082	Neuroactive ligand signaling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00071	Fatty acid degradation	2
gma00350	Tyrosine metabolism	2
gma00620	Pyruvate metabolism	2
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra02010	ABC transporters	5
bra04981	Folate transport and metabolism	3
bra00062	Fatty acid elongation	2
bra04626	Plant-pathogen interaction	2
bra00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra01200	Carbon metabolism	2
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00860	Porphyrin metabolism	3
bra04814	Motor proteins	2
bra04075	Plant hormone signal transduction	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00860	Porphyrin metabolism	4
mtr00906	Carotenoid biosynthesis	3
mtr04082	Neuroactive ligand signaling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00020	Citrate cycle (TCA cycle)	3
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
mtr01230	Biosynthesis of amino acids	3
mtr00900	Terpenoid backbone biosynthesis	2
mtr04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00020	Citrate cycle (TCA cycle)	3
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
mtr01230	Biosynthesis of amino acids	3
mtr00900	Terpenoid backbone biosynthesis	2
mtr04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04082	Neuroactive ligand signaling	4
ghi00591	Linoleic acid metabolism	2
ghi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04082	Neuroactive ligand signaling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04082	Neuroactive ligand signaling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04082	Neuroactive ligand signaling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2
cit04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00280	Valine, leucine and isoleucine degradation	4
sly00350	Tyrosine metabolism	2
sly01240	Biosynthesis of cofactors	2
sly00270	Cysteine and methionine metabolism	2
sly00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	4
nta00280	Valine, leucine and isoleucine degradation	4
nta00270	Cysteine and methionine metabolism	2
nta00290	Valine, leucine and isoleucine biosynthesis	2
nta00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04082	Neuroactive ligand signaling	4
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04082	Neuroactive ligand signaling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	5
sbi01200	Carbon metabolism	4
sbi00010	Glycolysis / Gluconeogenesis	3
sbi01210	2-Oxocarboxylic acid metabolism	2
sbi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100256814

100267088

822536

831376

100787502

100794374

103875113

103854169

103850978

7482478

11418416

25490975

25490978

107902231

107890198

107961103

106371123

106382157

102612989

102613290

101264793

102589739

102593025

107828076

107828074

4336049

4340559

103629935

100285277

123045669

123159588

123426917

123426915

123430199

8065525

8073431

100834390

100822506

The preparation time of this page was 0.1 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	2	2	3	1	3	3	2	2	1	3	2	2	2	1	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100253027 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100253027 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**