ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	104879421	probable methyltransferase PMT19
vvi-u.5	100258938	probable methyltransferase PMT15
ath-u.5	AT1G33170	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT2G43200	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ath-u.5	AT2G45750	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100814235	probable methyltransferase PMT16
gma-u.5	100817472	probable methyltransferase PMT15
bra-r.6	103866918	probable methyltransferase PMT16
bra-r.6	103833637	probable methyltransferase PMT18
ppo-u.5	7486033	probable methyltransferase PMT19
ppo-u.5	7496925	probable methyltransferase PMT15
mtr-u.5	25502324	probable methyltransferase PMT15
mtr-u.5	11414150	probable methyltransferase PMT19
ghi-r.1	107918379	probable methyltransferase PMT17
bna-r.1	106379743	probable methyltransferase PMT17
bna-r.1	106411362	probable methyltransferase PMT18
cit-r.1	102618426	probable methyltransferase PMT18
cit-r.1	102623502	probable methyltransferase PMT15
cit-r.1	102626451	probable methyltransferase PMT15
sly-u.5	101244023	probable methyltransferase PMT15
sly-u.5	101244509	probable methyltransferase PMT18
sly-u.5	101260175	probable methyltransferase PMT15
sot-r.1	102600417	probable methyltransferase PMT15
sot-r.1	102589482	probable methyltransferase PMT15
nta-r.1	107767731	putative methyltransferase PMT18
nta-r.1	107761752	putative methyltransferase PMT15
nta-r.1	107765199	putative methyltransferase PMT15
osa-u.5	4339850	probable methyltransferase PMT17
osa-u.5	4330300	probable methyltransferase PMT15
osa-u.5	4336714	probable methyltransferase PMT15
zma-u.5	100384329	uncharacterized LOC100384329
zma-u.5	100282582	uncharacterized LOC100282582
zma-u.5	100281416	methyltransferase
tae-r.2	123046271	probable methyltransferase PMT15
tae-r.2	123054138	probable methyltransferase PMT15
tae-r.2	123088419	probable methyltransferase PMT17
hvu-r.1	123403521	probable methyltransferase PMT15
hvu-r.1	123403805	probable methyltransferase PMT17
hvu-r.1	123410518	probable methyltransferase PMT18
sbi-r.1	8073909	probable methyltransferase PMT15
sbi-r.1	8065363	probable methyltransferase PMT17
sbi-r.1	8065861	probable methyltransferase PMT18
bdi-r.1	100821431	probable methyltransferase PMT17
bdi-r.1	100828212	probable methyltransferase PMT17
bdi-r.1	100831094	probable methyltransferase PMT15

Top 50 coexpressed genes to 104879421 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 104879421 (vvi-u.5 coexpression data)

CoexMap"100253996"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(122 genes)	IEA
GO:0005768 [list] [network] endosome	(148 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4496 genes)	IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(310 genes)

IEA

Protein

XP_002269747.2 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 3, cyto_mito 3, mito_plas 3

(predict for XP_002269747.2)

Subcellular
localization
TargetP

mito 6

(predict for XP_002269747.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 104879421	vvi-u.5 for 100258938	ath-u.5 for AT1G33170	ath-u.5 for AT2G43200	ath-u.5 for AT2G45750	gma-u.5 for 100814235	gma-u.5 for 100817472	bra-r.6 for 103866918	bra-r.6 for 103833637	ppo-u.5 for 7486033	ppo-u.5 for 7496925	mtr-u.5 for 25502324	mtr-u.5 for 11414150	ghi-r.1 for 107918379	bna-r.1 for 106379743	bna-r.1 for 106411362	cit-r.1 for 102618426	cit-r.1 for 102623502	cit-r.1 for 102626451	sly-u.5 for 101244023	sly-u.5 for 101244509	sly-u.5 for 101260175	sot-r.1 for 102600417	sot-r.1 for 102589482	nta-r.1 for 107767731	nta-r.1 for 107761752	nta-r.1 for 107765199	osa-u.5 for 4339850	osa-u.5 for 4330300	osa-u.5 for 4336714	zma-u.5 for 100384329	zma-u.5 for 100282582	zma-u.5 for 100281416	tae-r.2 for 123046271	tae-r.2 for 123054138	tae-r.2 for 123088419	hvu-r.1 for 123403521	hvu-r.1 for 123403805	hvu-r.1 for 123410518	sbi-r.1 for 8073909	sbi-r.1 for 8065363	sbi-r.1 for 8065861	bdi-r.1 for 100821431	bdi-r.1 for 100828212	bdi-r.1 for 100831094

Ortholog

Ortholog ID: 618

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable methyltransferase PMT19

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein