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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100254168   large ribosomal subunit protein mL43 
 vvi-r.5   100254168   large ribosomal subunit protein mL43 
 vvi-m.5   100254168   large ribosomal subunit protein mL43 
 ath-u.5   AT3G59650   mitochondrial ribosomal protein L51/S25/CI-B8 family protein 
 gma-u.5   100813455   54S ribosomal protein L51, mitochondrial 
 gma-u.5   100778783   54S ribosomal protein L51, mitochondrial 
 bra-r.6   103841810   54S ribosomal protein L51, mitochondrial 
 bra-r.6   103830223   54S ribosomal protein L51, mitochondrial 
 ppo-u.5   18104582   54S ribosomal protein L51, mitochondrial 
 mtr-u.5   11440382   54S ribosomal protein L51, mitochondrial 
 ghi-r.1   107949176   54S ribosomal protein L51, mitochondrial 
 ghi-r.1   107937417   54S ribosomal protein L51, mitochondrial 
 ghi-r.1   107914464   54S ribosomal protein L51, mitochondrial 
 bna-r.1   106406431   54S ribosomal protein L51, mitochondrial 
 bna-r.1   111198641   54S ribosomal protein L51, mitochondrial-like 
 bna-r.1   106353147   54S ribosomal protein L51, mitochondrial 
 cit-r.1   102614735   54S ribosomal protein L51, mitochondrial 
 sly-u.5   101244479   mitochondrial ribosomal protein L51/S25/CI-B8 family protein 
 sot-r.1   102592446   54S ribosomal protein L51, mitochondrial 
 nta-r.1   107765301   large ribosomal subunit protein mL43-like 
 nta-r.1   107808930   large ribosomal subunit protein mL43 
 osa-u.5   9266128   large ribosomal subunit protein mL43 
 zma-u.5   100282391   uncharacterized LOC100282391 
 zma-u.5   100191814   mitochondrial ribosomal protein L51/S25/CI-B8 family protein 
 tae-r.2   123093050   54S ribosomal protein L51, mitochondrial 
 tae-r.2   123077851   54S ribosomal protein L51, mitochondrial 
 tae-r.2   123085017   54S ribosomal protein L51, mitochondrial 
 hvu-r.1   123449375   54S ribosomal protein L51, mitochondrial 
 sbi-r.1   8054223   54S ribosomal protein L51, mitochondrial 
 sbi-r.1   8065731   54S ribosomal protein L51, mitochondrial 
 bdi-r.1   100821546   54S ribosomal protein L51, mitochondrial 
 cre-r.1   CHLRE_06g270650v5   uncharacterized protein 

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Top 50 coexpressed genes to 100254168 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100254168 (vvi-u.5 coexpression data)

CoexMap"100254168"


vviLOC100254168 | Entrez gene ID : 100254168      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 1 3 3 1 1 1 2 1 2 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03010 [list] [network] Ribosome (544 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (19 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (17 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (288 genes)  IEA  
Protein XP_002276080.1 [sequence] [blastp]
XP_002276106.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1  (predict for XP_002276080.1)
mito 6,  chlo 2,  nucl 1  (predict for XP_002276106.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002276080.1)
mito 6  (predict for XP_002276106.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100254168
vvi-r.5
for
100254168
vvi-m.5
for
100254168
ath-u.5
for
AT3G59650
gma-u.5
for
100813455
gma-u.5
for
100778783
bra-r.6
for
103841810
bra-r.6
for
103830223
ppo-u.5
for
18104582
mtr-u.5
for
11440382
ghi-r.1
for
107949176
ghi-r.1
for
107937417
ghi-r.1
for
107914464
bna-r.1
for
106406431
bna-r.1
for
111198641
bna-r.1
for
106353147
cit-r.1
for
102614735
sly-u.5
for
101244479
sot-r.1
for
102592446
nta-r.1
for
107765301
nta-r.1
for
107808930
osa-u.5
for
9266128
zma-u.5
for
100282391
zma-u.5
for
100191814
tae-r.2
for
123093050
tae-r.2
for
123077851
tae-r.2
for
123085017
hvu-r.1
for
123449375
sbi-r.1
for
8054223
sbi-r.1
for
8065731
bdi-r.1
for
100821546
cre-r.1
for
CHLRE_06g270650v5


Ortholog ID: 6026
Species vvi ath gma gma bra bra ppo mtr ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC100254168 AT3G59650 LOC100813455 LOC100778783 LOC103841810 LOC103830223 LOC18104582 LOC11440382 LOC107949176 LOC107937417 LOC107914614 LOC106406431 LOC111198641 LOC106429520 LOC102614735 LOC101244479 LOC102592446 LOC107765301 LOC107808930 LOC9266128 LOC100282391 LOC100191814 LOC123093050 LOC123069328 LOC123060770 LOC123449375 LOC8054223 LOC8065731 LOC100821546 CHLRE_06g270650v5
Function* large ribosomal subunit protein mL43 mitochondrial ribosomal protein L51/S25/CI-B8 family protein 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial-like 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial mitochondrial ribosomal protein L51/S25/CI-B8 family protein 54S ribosomal protein L51, mitochondrial large ribosomal subunit protein mL43-like large ribosomal subunit protein mL43 large ribosomal subunit protein mL43 uncharacterized LOC100282391 mitochondrial ribosomal protein L51/S25/CI-B8 family protein 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial 54S ribosomal protein L51, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly00190 Oxidative phosphorylation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03040 Spliceosome 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100254168 825134 100813455 100778783 103841810 103830223 18104582 11440382 107949176 107937417 107914614 106406431 111198641 106429520 102614735 101244479 102592446 107765301 107808930 9266128 100282391 100191814 123093050 123069328 123060770 123449375 8054223 8065731 100821546 5721849
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