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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100255258   uncharacterized LOC100255258 
 vvi-r.5   100255258   uncharacterized LOC100255258 
 ath-u.5   AT2G46560   transducin family protein / WD-40 repeat family protein 
 gma-u.5   100795225   uncharacterized LOC100795225 
 gma-u.5   100789935   uncharacterized LOC100789935 
 bra-r.6   103866455   uncharacterized LOC103866455 
 ppo-u.5   7497260   uncharacterized LOC7497260 
 mtr-u.5   25500663   uncharacterized LOC25500663 
 ghi-r.1   107923883   uncharacterized LOC107923883 
 ghi-r.1   107923863   uncharacterized LOC107923863 
 bna-r.1   106450493   uncharacterized LOC106450493 
 bna-r.1   106414364   uncharacterized LOC106414364 
 cit-r.1   102628884   uncharacterized LOC102628884 
 cit-r.1   127901466   uncharacterized LOC127901466 
 sly-u.5   101249217   uncharacterized LOC101249217 
 sot-r.1   102588082   uncharacterized LOC102588082 
 nta-r.1   107791785   uncharacterized LOC107791785 
 nta-r.1   107797510   uncharacterized LOC107797510 
 osa-u.5   4325848   uncharacterized LOC4325848 
 zma-u.5   103635990   transducin family protein / WD-40 repeat family protein 
 tae-r.2   123078343   uncharacterized LOC123078343 
 tae-r.2   123069800   uncharacterized LOC123069800 
 tae-r.2   123061273   uncharacterized LOC123061273 
 hvu-r.1   123443688   uncharacterized LOC123443688 
 sbi-r.1   8075475   uncharacterized LOC8075475 
 bdi-r.1   100827475   uncharacterized LOC100827475 
 cre-r.1   CHLRE_04g223000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100255258 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100255258 (vvi-u.5 coexpression data)

CoexMap"100255258"


vviLOC100255258 | Entrez gene ID : 100255258    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 2 2 2 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04142 [list] [network] Lysosome (69 genes)
GO BP
GO:0007035 [list] [network] vacuolar acidification  (5 genes)  IEA  
GO CC
GO:0043291 [list] [network] RAVE complex  (1 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002264136.4 [sequence] [blastp]
XP_010661961.2 [sequence] [blastp]
XP_010661962.1 [sequence] [blastp]
XP_019081152.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_002264136.4)
nucl 2,  chlo 2,  cysk_nucl 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_010661961.2)
chlo 4,  nucl 3,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_010661962.1)
nucl 4,  golg 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_019081152.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002264136.4)
other 9  (predict for XP_010661961.2)
other 4,  mito 4  (predict for XP_010661962.1)
other 9  (predict for XP_019081152.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100255258
vvi-r.5
for
100255258
ath-u.5
for
AT2G46560
gma-u.5
for
100795225
gma-u.5
for
100789935
bra-r.6
for
103866455
ppo-u.5
for
7497260
mtr-u.5
for
25500663
ghi-r.1
for
107923883
ghi-r.1
for
107923863
bna-r.1
for
106450493
bna-r.1
for
106414364
cit-r.1
for
102628884
cit-r.1
for
127901466
sly-u.5
for
101249217
sot-r.1
for
102588082
nta-r.1
for
107791785
nta-r.1
for
107797510
osa-u.5
for
4325848
zma-u.5
for
103635990
tae-r.2
for
123078343
tae-r.2
for
123069800
tae-r.2
for
123061273
hvu-r.1
for
123443688
sbi-r.1
for
8075475
bdi-r.1
for
100827475
cre-r.1
for
CHLRE_04g223000v5


Ortholog ID: 9444
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100255258 AT2G46560 LOC100795225 LOC100789935 LOC103866455 LOC7497260 LOC25500663 LOC107923883 LOC107923863 LOC106450493 LOC106414364 LOC102628884 LOC127901466 LOC101249217 LOC102588082 LOC107791785 LOC107797510 LOC4325848 LOC103635990 LOC123078343 LOC123069800 LOC123061273 LOC123443688 LOC8075475 LOC100827475 CHLRE_04g223000v5
Function* uncharacterized LOC100255258 transducin family protein / WD-40 repeat family protein uncharacterized LOC100795225 uncharacterized LOC100789935 uncharacterized LOC103866455 uncharacterized LOC7497260 uncharacterized LOC25500663 uncharacterized LOC107923883 uncharacterized LOC107923863 uncharacterized LOC106450493 uncharacterized LOC106414364 uncharacterized LOC102628884 uncharacterized LOC127901466 uncharacterized LOC101249217 uncharacterized LOC102588082 uncharacterized LOC107791785 uncharacterized LOC107797510 uncharacterized LOC4325848 transducin family protein / WD-40 repeat family protein uncharacterized LOC123078343 uncharacterized LOC123069800 uncharacterized LOC123061273 uncharacterized LOC123443688 uncharacterized LOC8075475 uncharacterized LOC100827475 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi03082 ATP-dependent chromatin remodeling 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae00310 Lysine degradation 3
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04145 Phagosome 3
tae00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100255258 819268 100795225 100789935 103866455 7497260 25500663 107923883 107923863 106450493 106414364 102628884 127901466 101249217 102588082 107791785 107797510 4325848 103635990 123078343 123069800 123061273 123443688 8075475 100827475 5717874
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