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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250590   cyclin-A1-1 
 ath-u.5   CYCA1;1   Cyclin A1;1 
 gma-u.5   CYCA1;1   mitotic cyclin a2-type 
 gma-u.5   100798216   cyclin-A1-4 
 gma-u.5   100789565   cyclin-A1-1 
 ppo-u.5   18096203   cyclin-A1-1 
 ppo-u.5   7460975   cyclin-A1-1 
 mtr-u.5   25489689   cyclin-A1-1 
 sly-u.5   CycA1   cyclin A1 
 osa-u.5   4338177   cyclin-A1-4-like 
 osa-u.5   9268829   cyclin-A1-3-like 
 zma-u.5   103635708   cyclin-A1-4 
 zma-u.5   103649996   cyclin-A1-1-like 
 zma-u.5   542336   cyclin 2 

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Top 50 coexpressed genes to 100250590 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250590 (vvi-u.5 coexpression data)

CoexMap"100255774"


vviLOC100255774 | Entrez gene ID : 100255774      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 3 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044772 [list] [network] mitotic cell cycle phase transition  (32 genes)  IEA  
GO:0000079 [list] [network] regulation of cyclin-dependent protein serine/threonine kinase activity  (42 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (60 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (41 genes)  IEA  
Protein XP_059590996.1 [sequence] [blastp]
XP_059590997.1 [sequence] [blastp]
XP_059590998.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  mito 1,  vacu 1,  chlo 1,  E.R. 1,  golg 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_plas 1  (predict for XP_059590996.1)
nucl 4,  cyto 2,  mito 1,  vacu 1,  chlo 1,  golg 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_059590997.1)
nucl 4,  cyto 2,  mito 1,  vacu 1,  cyto_E.R. 1  (predict for XP_059590998.1)
Subcellular
localization
TargetP
other 9  (predict for XP_059590996.1)
other 9  (predict for XP_059590997.1)
other 9  (predict for XP_059590998.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250590
ath-u.5
for
CYCA1;1
gma-u.5
for
CYCA1;1
gma-u.5
for
100798216
gma-u.5
for
100789565
ppo-u.5
for
18096203
ppo-u.5
for
7460975
mtr-u.5
for
25489689
sly-u.5
for
CycA1
osa-u.5
for
4338177
osa-u.5
for
9268829
zma-u.5
for
103635708
zma-u.5
for
103649996
zma-u.5
for
542336


Ortholog ID: 3398
Species vvi ath gma gma bra bra ppo ppo mtr ghi ghi bna cit cit sly sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol LOC100250590 CYCA1;1 LOC100798216 LOC100776207 LOC103868732 LOC103851094 LOC18096203 LOC7460975 LOC25489689 LOC121210909 LOC107951959 LOC111213687 LOC102617267 LOC102616765 CycA1 LOC102582879 LOC107794571 LOC107783616 LOC4338177 LOC9268829 LOC542336 LOC103649996 LOC123077889 LOC123112975 LOC123443271 LOC8078082 LOC8054654 LOC100822112 LOC100845679 CHLRE_03g207900v5
Function* cyclin-A1-1 Cyclin A1;1 cyclin-A1-4 cyclin-A1-1-like cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1 cyclin-A1-1-like cyclin-A1-1 cyclin-A1-4-like cyclin A1 cyclin-A1-4 cyclin-A1-4-like cyclin-A1-4-like cyclin-A1-4-like cyclin-A1-3-like cyclin 2 cyclin-A1-1-like cyclin-A1-2 cyclin-A1-4 cyclin-A1-2-like cyclin-A1-3 cyclin-A1-1 cyclin-A1-4-like cyclin-A1-1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00330 Arginine and proline metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250590 841014 100798216 100776207 103868732 103851094 18096203 7460975 25489689 121210909 107951959 111213687 102617267 102616765 543744 102582879 107794571 107783616 4338177 9268829 542336 103649996 123077889 123112975 123443271 8078082 8054654 100822112 100845679 5718813
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