ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100254978	uncharacterized LOC100254978
ath-u.5	AT5G16200	50S ribosomal protein-like protein
ath-u.5	AT1G66890	50S ribosomal-like protein
ath-u.5	AT1G68430	uncharacterized protein
gma-u.5	102665843	uncharacterized LOC102665843
gma-u.5	102667529	uncharacterized LOC102667529
gma-u.5	102670217	uncharacterized LOC102670217
bra-r.6	103852480	uncharacterized LOC103852480
bra-r.6	103831254	uncharacterized LOC103831254
bra-r.6	103831141	uncharacterized LOC103831141
ppo-u.5	18099459	uncharacterized LOC18099459
ppo-u.5	18109658	uncharacterized LOC18109658
ppo-u.5	7477436	uncharacterized LOC7477436
mtr-u.5	11442396	uncharacterized LOC11442396
mtr-u.5	120577940	uncharacterized LOC120577940
ghi-r.1	107948241	uncharacterized LOC107948241
ghi-r.1	107912919	uncharacterized LOC107912919
ghi-r.1	107912753	uncharacterized LOC107912753
bna-r.1	111207006	uncharacterized LOC111207006
cit-r.1	102628956	uncharacterized LOC102628956
cit-r.1	102627959	hypothetical protein
sly-u.5	101258532	uncharacterized LOC101258532
sly-u.5	104645727	uncharacterized LOC104645727
sot-r.1	102584321	uncharacterized LOC102584321
nta-r.1	107821810	uncharacterized LOC107821810
nta-r.1	107791390	uncharacterized LOC107791390
nta-r.1	107783564	uncharacterized LOC107783564
osa-u.5	4345373	uncharacterized LOC4345373
tae-r.2	123062849	uncharacterized LOC123062849
tae-r.2	123075107	uncharacterized LOC123075107
sbi-r.1	110436880	uncharacterized LOC110436880
bdi-r.1	100829115	keratin, type II cytoskeletal 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002283764.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, chlo_mito 5, mito 3

(predict for XP_002283764.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_002283764.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100254978	ath-u.5 for AT5G16200	ath-u.5 for AT1G66890	ath-u.5 for AT1G68430	gma-u.5 for 102665843	gma-u.5 for 102667529	gma-u.5 for 102670217	bra-r.6 for 103852480	bra-r.6 for 103831254	bra-r.6 for 103831141	ppo-u.5 for 18099459	ppo-u.5 for 18109658	ppo-u.5 for 7477436	mtr-u.5 for 11442396	mtr-u.5 for 120577940	ghi-r.1 for 107948241	ghi-r.1 for 107912919	ghi-r.1 for 107912753	bna-r.1 for 111207006	cit-r.1 for 102628956	cit-r.1 for 102627959	sly-u.5 for 101258532	sly-u.5 for 104645727	sot-r.1 for 102584321	nta-r.1 for 107821810	nta-r.1 for 107791390	nta-r.1 for 107783564	osa-u.5 for 4345373	tae-r.2 for 123062849	tae-r.2 for 123075107	sbi-r.1 for 110436880	bdi-r.1 for 100829115

Ortholog

Ortholog ID: 4127

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

tae

sbi

bdi

Symbol

Function^*

uncharacterized LOC100254978

50S ribosomal protein-like protein

50S ribosomal-like protein

uncharacterized protein

uncharacterized LOC102665843

uncharacterized LOC102667529

uncharacterized LOC102661205

uncharacterized LOC103852480

uncharacterized LOC103831141

uncharacterized LOC18099459

uncharacterized LOC18109658

uncharacterized LOC7477436

uncharacterized LOC11442396

uncharacterized LOC120577940

uncharacterized LOC107948241

uncharacterized LOC107912919

uncharacterized LOC107912753

uncharacterized LOC106402357

uncharacterized LOC102628956

hypothetical protein

uncharacterized LOC101258532

uncharacterized LOC104645727

uncharacterized LOC102584321

uncharacterized LOC107791390

uncharacterized LOC107783564

uncharacterized LOC107802116

uncharacterized LOC4345373

uncharacterized LOC123062849

uncharacterized LOC123075107

uncharacterized LOC110436880

keratin, type II cytoskeletal 1

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma00030	Pentose phosphate pathway	2
gma00710	Carbon fixation by Calvin cycle	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00071	Fatty acid degradation	4
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot00541	Biosynthesis of various nucleotide sugars	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta04145	Phagosome	3
nta03022	Basal transcription factors	2
nta00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta03022	Basal transcription factors	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	4
tae04141	Protein processing in endoplasmic reticulum	4
tae04145	Phagosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	5
tae04141	Protein processing in endoplasmic reticulum	5
tae04145	Phagosome	5
tae03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

100254978

831478

843007

843172

102665843

102667529

102661205

103852480

103831141

18099459

18109658

7477436

11442396

120577940

107948241

107912919

107912753

106402357

102628956

102627959

101258532

104645727

102584321

107791390

107783564

107802116

4345373

123062849

123075107

110436880

100829115

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100254978 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100254978 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	tae	sbi	bdi	hvu	cre	zma
Paralog	1	3	3	3	3	2	3	1	2	2	1	3	1	2	1	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100254978 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100254978 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**