ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100246424	GEM-like protein 4
vvi-u.5	100244653	GEM-like protein 4
vvi-u.5	100244574	GEM-like protein 4
ath-u.5	AT5G23350	GRAM domain protein/ABA-responsive-like protein
ath-u.5	AT5G23360	GRAM domain-containing protein / ABA-responsive protein-like protein
gma-u.5	100805562	GEM-like protein 4
gma-u.5	100807154	GEM-like protein 4
bra-r.6	103865459	putative GEM-like protein 8
bra-r.6	103855778	GEM-like protein 4
bra-r.6	103854903	putative GEM-like protein 8
ppo-u.5	7457161	GEM-like protein 4
mtr-u.5	25482636	GEM-like protein 4
mtr-u.5	25485664	putative GEM-like protein 8
ghi-r.1	107887771	GEM-like protein 4
ghi-r.1	107894060	putative GEM-like protein 8
ghi-r.1	107886876	GEM-like protein 4
bna-r.1	106444265	putative GEM-like protein 8
bna-r.1	106444263	GEM-like protein 7
bna-r.1	106439885	GEM-like protein 7
cit-r.1	102619908	GEM-like protein 4
sly-u.5	101268672	putative GEM-like protein 8
sly-u.5	101252476	GEM-like protein 4
sly-u.5	101244273	putative GEM-like protein 8
sot-r.1	102583017	putative GEM-like protein 8
sot-r.1	102579259	putative GEM-like protein 8
sot-r.1	102578339	putative GEM-like protein 8
nta-r.1	142166953	putative GEM-like protein 8
nta-r.1	107817662	putative GEM-like protein 8
nta-r.1	107812291	putative GEM-like protein 8
osa-u.5	4336456	GEM-like protein 7
osa-u.5	4348963	putative GEM-like protein 8
osa-u.5	4336457	GEM-like protein 4
zma-u.5	100285617	FIP1
zma-u.5	103643434	GEM-like protein 7
zma-u.5	100272825	Putative GEM-like protein 8
tae-r.2	123041660	putative GEM-like protein 8
tae-r.2	123041659	GEM-like protein 7
tae-r.2	123049625	putative GEM-like protein 8
hvu-r.1	123427299	putative GEM-like protein 8
hvu-r.1	123427297	GEM-like protein 4
sbi-r.1	8067383	putative GEM-like protein 8
sbi-r.1	8056028	putative GEM-like protein 8
sbi-r.1	8056029	GEM-like protein 4
bdi-r.1	100825945	putative GEM-like protein 8
bdi-r.1	100824599	GEM-like protein 4
bdi-r.1	100825207	GEM-like protein 4

Top 50 coexpressed genes to 100246424 (vvi-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100246424 (vvi-u.5 coexpression data)

CoexMap"100256602"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_059596175.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, cyto 2, chlo_mito 2

(predict for XP_059596175.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_059596175.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100246424	vvi-u.5 for 100244653	vvi-u.5 for 100244574	ath-u.5 for AT5G23350	ath-u.5 for AT5G23360	gma-u.5 for 100805562	gma-u.5 for 100807154	bra-r.6 for 103865459	bra-r.6 for 103855778	bra-r.6 for 103854903	ppo-u.5 for 7457161	mtr-u.5 for 25482636	mtr-u.5 for 25485664	ghi-r.1 for 107887771	ghi-r.1 for 107894060	ghi-r.1 for 107886876	bna-r.1 for 106444265	bna-r.1 for 106444263	bna-r.1 for 106439885	cit-r.1 for 102619908	sly-u.5 for 101268672	sly-u.5 for 101252476	sly-u.5 for 101244273	sot-r.1 for 102583017	sot-r.1 for 102579259	sot-r.1 for 102578339	nta-r.1 for 142166953	nta-r.1 for 107817662	nta-r.1 for 107812291	osa-u.5 for 4336456	osa-u.5 for 4348963	osa-u.5 for 4336457	zma-u.5 for 100285617	zma-u.5 for 103643434	zma-u.5 for 100272825	tae-r.2 for 123041660	tae-r.2 for 123041659	tae-r.2 for 123049625	hvu-r.1 for 123427299	hvu-r.1 for 123427297	sbi-r.1 for 8067383	sbi-r.1 for 8056028	sbi-r.1 for 8056029	bdi-r.1 for 100825945	bdi-r.1 for 100824599	bdi-r.1 for 100825207

Ortholog

Ortholog ID: 247

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

GEM-like protein 4

GRAM domain protein/ABA-responsive-like protein

GRAM domain-containing protein / ABA-responsive protein-like protein

putative GEM-like protein 8

GEM-like protein 4

putative GEM-like protein 8

GEM-like protein 4

putative GEM-like protein 8

GEM-like protein 4

putative GEM-like protein 8

GEM-like protein 4

putative GEM-like protein 8

GEM-like protein 4

pleckstrin homology-like domain-containing protein

putative GEM-like protein 8

GEM-like protein 7

putative GEM-like protein 8

GEM-like protein 4

GEM-like protein 7

uncharacterized LOC103641863

putative GEM-like protein 8

GEM-like protein 7

putative GEM-like protein 8

GEM-like protein 4

putative GEM-like protein 8

GEM-like protein 7

putative GEM-like protein 8

GEM-like protein 4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	2
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	4
sot04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	5
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	3
sbi01230	Biosynthesis of amino acids	2
sbi00280	Valine, leucine and isoleucine degradation	2
sbi00640	Propanoate metabolism	2
sbi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	4
sbi00260	Glycine, serine and threonine metabolism	2
sbi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100242946

832399

832400

100813883

100804129

100787509

103865459

103854903

103854901

7457161

18100997

25502247

11414077

11445782

107886876

107886875

107886873

106404611

106385160

106348337

102619908

101243696

101266179

101261105

102579259

102578339

102583667

107777557

107769648

4336456

4348963

4336457

103643434

103641863

123134268

123185727

123137583

123427297

123402025

123402455

8067383

8067122

100825945

100824599

100829452

The preparation time of this page was 1.0 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	3	1	2	3	3	1	3	3	3	3	3	3	2	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100246424 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100246424 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**