ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	TIP2;1	aquaporin TIP2;1
vvi-u.5	TIP1;2	aquaporin-like
vvi-u.5	100252631	aquaporin TIP4-1
ath-u.5	GAMMA-TIP	gamma tonoplast intrinsic protein
ath-u.5	DELTA-TIP	delta tonoplast integral protein
gma-u.5	TIP4-1	aquaporin TIP4-1
gma-u.5	100814469	aquaporin TIP3-3
ppo-u.5	7471532	aquaporin TIP4-1
ppo-u.5	7468799	aquaporin TIP1-1
sly-u.5	101267949	aquaporin TIP1-1
sly-u.5	778315	aquaporin-like
sly-u.5	TIP2-2	tonoplast intrinsic protein 2.2
osa-u.5	4338163	probable aquaporin TIP4-1
osa-u.5	4340941	probable aquaporin TIP2-2
zma-u.5	100280539	uncharacterized LOC100280539
zma-u.5	541912	tonoplast intrinsic protein 3

functional annotation

KEGG

GO BP

GO:0006833 [list] [network] water transport	(10 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(879 genes)	IEA

GO CC

GO:0009705 [list] [network] plant-type vacuole membrane

(44 genes)

IEA

GO MF

GO:0015250 [list] [network] water channel activity

(19 genes)

IEA

Protein

XP_002277904.3 [sequence] [blastp]

Subcellular
localization
wolf

vacu 8, golg 1

(predict for XP_002277904.3)

Subcellular
localization
TargetP

scret 7, other 4

(predict for XP_002277904.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for TIP2;1	vvi-u.5 for TIP1;2	vvi-u.5 for 100252631	ath-u.5 for GAMMA-TIP	ath-u.5 for DELTA-TIP	gma-u.5 for TIP4-1	gma-u.5 for 100814469	ppo-u.5 for 7471532	ppo-u.5 for 7468799	sly-u.5 for 101267949	sly-u.5 for 778315	sly-u.5 for TIP2-2	osa-u.5 for 4338163	osa-u.5 for 4340941	zma-u.5 for 100280539	zma-u.5 for 541912

Ortholog ID: 83

Species

vvi

ath

gma

bra

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC100263698

TIP1;1

TIP2;2

Function^*

aquaporin TIP1-1

aquaporin-like

tonoplast intrinsic protein 2;2

gamma tonoplast intrinsic protein

aquaporin TIP2-5

probable aquaporin TIP3-2

aquaporin TIP2-1

aquaporin TIP4-1

probable aquaporin TIP-type

probable aquaporin TIP1-2

aquaporin TIP3-1

aquaporin TIP1-3

aquaporin TIP4-1

aquaporin TIP2-1

probable aquaporin TIP5-1

aquaporin-like

aquaporin TIP1-1

aquaporin TIP2-1-like

putative aquaporin TIP1-1

putative aquaporin TIP-type RB7-18C

probable aquaporin TIP3-1

probable aquaporin TIP3-2

aquaporin TIP4-2-like

probable aquaporin TIP2-2

aquaporin TIP2-3

probable aquaporin TIP3-1

aquaporin TIP4-4

probable aquaporin TIP4-3

probable aquaporin TIP4-2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	4
sot00940	Phenylpropanoid biosynthesis	4
sot00910	Nitrogen metabolism	2
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	3
tae00561	Glycerolipid metabolism	3
tae00600	Sphingolipid metabolism	3
tae00603	Glycosphingolipid biosynthesis - globo and isoglobo series	3
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi04146	Peroxisome	3
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

100263698

100233003

827446

818255

100805635

103872561

11435009

11432805

107929356

121212692

106399493

106426631

102611770

102624065

101261595

778315

102589703

102596615

107830277

107802889

4348981

4336464

103635714

100037645

123041819

123409954

8078102

100844557

100838461

5719640

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to TIP2;1 (vvi-u.5 coexpression data)

Top 50 enrichment test to TIP2;1 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	sly	osa	zma	bdi	mtr	bra	hvu	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	2	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to TIP2;1 (vvi-u.5 coexpression data)

Top 50 enrichment test to TIP2;1 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**