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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100259307   protein CHUP1, chloroplastic 
 vvi-r.5   100259307   protein CHUP1, chloroplastic 
 vvi-m.5   100259307   protein CHUP1, chloroplastic 
 ath-u.5   CHUP1   Hydroxyproline-rich glycoprotein family protein 
 gma-u.5   100813394   protein CHUP1, chloroplastic 
 gma-u.5   100802696   protein CHUP1, chloroplastic 
 gma-u.5   100785291   protein CHUP1, chloroplastic 
 ppo-u.5   7489375   protein CHUP1, chloroplastic 
 mtr-u.5   11442126   protein CHUP1, chloroplastic 
 sly-u.5   101267989   protein CHUP1, chloroplastic 
 osa-u.5   9270397   protein CHUP1, chloroplastic 
 osa-u.5   9269069   protein CHUP1, chloroplastic 
 zma-u.5   109941797   protein CHUP1, chloroplastic-like 

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Top 50 coexpressed genes to 100259307 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259307 (vvi-u.5 coexpression data)

CoexMap"100259307"


vviLOC100259307 | Entrez gene ID : 100259307      
Species vvi ath gma ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 3 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (85 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (32 genes)  IEA  
GO MF
Protein XP_002281154.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_002281154.2)
Subcellular
localization
TargetP
mito 4,  scret 3  (predict for XP_002281154.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100259307

.
vvi-r.5
for
100259307

.
vvi-m.5
for
100259307

.
ath-u.5
for
CHUP1

.
gma-u.5
for
100813394

.
gma-u.5
for
100802696

.
gma-u.5
for
100785291

.
ppo-u.5
for
7489375

.
mtr-u.5
for
11442126

.
sly-u.5
for
101267989

.
osa-u.5
for
9270397

.
osa-u.5
for
9269069

.
zma-u.5
for
109941797

.


Ortholog ID: 8966
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sot cit bdi nta nta
Symbol CHUP1 LOC100813394 LOC100802696 LOC101267989 LOC9269069 LOC9270397 LOC109941797 LOC103875358 LOC100259307 LOC7489375 LOC11442126 LOC123183226 LOC123069348 LOC123451403 LOC107934797 LOC107946456 LOC106349398 LOC106410120 LOC102581030 LOC102618828 LOC100830416 LOC107778512 LOC107823870
Function* Hydroxyproline-rich glycoprotein family protein protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00710 Carbon fixation by Calvin cycle 5
ath00260 Glycine, serine and threonine metabolism 3
ath04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
gma01230 Biosynthesis of amino acids 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
gma01200 Carbon metabolism 2
gma03010 Ribosome 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly00260 Glycine, serine and threonine metabolism 3
sly01200 Carbon metabolism 3
sly00670 One carbon pool by folate 2
sly00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00710 Carbon fixation by Calvin cycle 4
osa01200 Carbon metabolism 4
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00710 Carbon fixation by Calvin cycle 6
bra00620 Pyruvate metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 4
vvi01200 Carbon metabolism 4
vvi04146 Peroxisome 3
vvi00260 Glycine, serine and threonine metabolism 3
vvi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae01200 Carbon metabolism 5
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00260 Glycine, serine and threonine metabolism 5
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00260 Glycine, serine and threonine metabolism 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00630 Glyoxylate and dicarboxylate metabolism 4
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 4
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta00030 Pentose phosphate pathway 2
nta00230 Purine metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822157 100813394 100802696 101267989 9269069 9270397 109941797 103875358 100259307 7489375 11442126 123183226 123069348 123451403 107934797 107946456 106349398 106410120 102581030 102618828 100830416 107778512 107823870
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