ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100246084	laccase-11
ath-u.5	LAC11	laccase 11
gma-u.5	100820452	laccase-11
gma-u.5	100779180	laccase-11
ppo-u.5	7480134	laccase-11
ppo-u.5	7457527	laccase-11
ppo-u.5	7469998	laccase-11
mtr-u.5	11412332	laccase-11
mtr-u.5	11407541	laccase-11
sly-u.5	101262977	laccase-11-like
sly-u.5	101263266	laccase-11
sly-u.5	101249792	laccase-11
osa-u.5	107276614	laccase-2

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(77 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(125 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(77 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(125 genes)	IEA

Protein

XP_003632636.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, nucl 1, pero 1, chlo 1, cyto 1, vacu 1, E.R. 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_003632636.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003632636.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100246084	ath-u.5 for LAC11	gma-u.5 for 100820452	gma-u.5 for 100779180	ppo-u.5 for 7480134	ppo-u.5 for 7457527	ppo-u.5 for 7469998	mtr-u.5 for 11412332	mtr-u.5 for 11407541	sly-u.5 for 101262977	sly-u.5 for 101263266	sly-u.5 for 101249792	osa-u.5 for 107276614

Ortholog ID: 4613

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

Symbol

LAC11

Function^*

laccase-11

laccase 11

laccase-11

laccase-11-like

laccase-11

laccase-11-like

laccase-2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00051	Fructose and mannose metabolism	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

100246084

831887

100792148

100779180

103847396

103850483

7480134

7469998

11412332

11407541

107913486

107914267

106360585

106372627

102607588

101249792

101262977

102578526

102584221

107792419

107276614

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100246084 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100246084 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae	zma
Paralog	1	1	2	3	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100246084 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100246084 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**