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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260829   DExH-box ATP-dependent RNA helicase DExH6 
 vvi-r.5   100260829   DExH-box ATP-dependent RNA helicase DExH6 
 vvi-m.5   100260829   DExH-box ATP-dependent RNA helicase DExH6 
 ath-u.5   HVT1   helicase in vascular tissue and tapetum 
 ath-u.5   NIH   nuclear DEIH-boxhelicase 
 gma-u.5   100810272   DExH-box ATP-dependent RNA helicase DExH6 
 gma-u.5   100782189   DExH-box ATP-dependent RNA helicase DExH6 
 ppo-u.5   7464663   DExH-box ATP-dependent RNA helicase DExH6 
 mtr-u.5   11429946   DExH-box ATP-dependent RNA helicase DExH6 
 sly-u.5   101247633   DExH-box ATP-dependent RNA helicase DExH6 
 osa-u.5   4325502   DExH-box ATP-dependent RNA helicase DExH6 
 zma-u.5   100384291   DExH-box ATP-dependent RNA helicase DExH6 

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Top 50 coexpressed genes to 100260829 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260829 (vvi-u.5 coexpression data)

CoexMap"100260829"


vviLOC100260829 | Entrez gene ID : 100260829      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03018 [list] [network] RNA degradation (97 genes)
GO BP
GO CC
GO:0005622 [list] [network] intracellular anatomical structure  (6882 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002278608.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 2,  nucl 1,  mito 1  (predict for XP_002278608.2)
Subcellular
localization
TargetP
other 6  (predict for XP_002278608.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260829
vvi-r.5
for
100260829
vvi-m.5
for
100260829
ath-u.5
for
HVT1
ath-u.5
for
NIH
gma-u.5
for
100810272
gma-u.5
for
100782189
ppo-u.5
for
7464663
mtr-u.5
for
11429946
sly-u.5
for
101247633
osa-u.5
for
4325502
zma-u.5
for
100384291


Ortholog ID: 9408
Species vvi ath ath gma gma bra bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100260829 NIH HVT1 LOC100810272 LOC100782189 LOC103867932 LOC103865072 LOC7464663 LOC11429946 LOC107959639 LOC107959741 LOC106426380 LOC106348377 LOC102624626 LOC101247633 LOC102602592 LOC107768344 LOC107776304 LOC4325502 LOC100384291 LOC123079288 LOC123070902 LOC123444507 LOC8072118 LOC100834707
Function* DExH-box ATP-dependent RNA helicase DExH6 nuclear DEIH-boxhelicase helicase in vascular tissue and tapetum DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6-like DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 ATP-dependent RNA helicase DHX36 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6-like DExH-box ATP-dependent RNA helicase DExH6 DExH-box ATP-dependent RNA helicase DExH6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03018 RNA degradation 2
gma03040 Spliceosome 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03082 ATP-dependent chromatin remodeling 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03018 RNA degradation 2
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260829 837177 817631 100810272 100782189 103867932 103865072 7464663 11429946 107959639 107959741 106426380 106348377 102624626 101247633 102602592 107768344 107776304 4325502 100384291 123079288 123070902 123444507 8072118 100834707
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