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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260890   growth-regulating factor 1 
 vvi-r.5   100260890   growth-regulating factor 1 
 vvi-u.5   100853530   growth-regulating factor 1 
 ath-u.5   GRF1   growth-regulating factor 1 
 ath-u.5   GRF2   growth-regulating factor 2 
 gma-u.5   GRF18   growth-regulating factor 
 gma-u.5   GRF21   growth-regulating factor 
 gma-u.5   GRF19   growth-regulating factor 
 ppo-u.5   7472639   growth-regulating factor 6-like 
 ppo-u.5   7497735   growth-regulating factor 1 
 ppo-u.5   7464777   growth-regulating factor 1 
 mtr-u.5   25482044   growth-regulating factor 1 
 sly-u.5   101252681   growth-regulating factor 1-like 
 sly-u.5   101244049   growth-regulating factor 2-like 
 osa-u.5   9268363   growth-regulating factor 7-like 
 osa-u.5   4333990   growth-regulating factor 6-like 
 zma-u.5   100285734   uncharacterized LOC100285734 
 zma-u.5   100191470   uncharacterized LOC100191470 

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Top 50 coexpressed genes to 100260890 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260890 (vvi-u.5 coexpression data)

CoexMap"100260890"


vviLOC100260890 | Entrez gene ID : 100260890      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (199 genes)  IEA  
GO:0032502 [list] [network] developmental process  (306 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1359 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_002283504.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002283504.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002283504.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260890
vvi-r.5
for
100260890
vvi-u.5
for
100853530
ath-u.5
for
GRF1
ath-u.5
for
GRF2
gma-u.5
for
GRF18
gma-u.5
for
GRF21
gma-u.5
for
GRF19
ppo-u.5
for
7472639
ppo-u.5
for
7497735
ppo-u.5
for
7464777
mtr-u.5
for
25482044
sly-u.5
for
101252681
sly-u.5
for
101244049
osa-u.5
for
9268363
osa-u.5
for
4333990
zma-u.5
for
100285734
zma-u.5
for
100191470


Ortholog ID: 3199
Species vvi vvi ath ath gma gma bra bra ppo ppo mtr ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi bdi
Symbol LOC100260890 LOC100853530 GRF1 GRF2 GRF22 GRF18 LOC103862578 LOC103858126 LOC7497735 LOC7464777 LOC25482044 LOC121202961 LOC107938334 LOC125584397 LOC106407512 LOC102618741 LOC101252681 LOC101244049 LOC102582107 LOC102595967 LOC107764760 LOC107808379 LOC9268363 LOC4333990 LOC100285734 LOC100191470 LOC123090965 LOC123087001 LOC123447656 LOC8060535 LOC100833132
Function* growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 2 growth-regulating factor growth-regulating factor growth-regulating factor 2 growth-regulating factor 2 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1 growth-regulating factor 1-like growth-regulating factor 2-like growth-regulating factor 1 growth-regulating factor 1-like growth-regulating factor 2-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1 growth-regulating factor 1-like growth-regulating factor 7-like growth-regulating factor 6-like uncharacterized LOC100285734 uncharacterized LOC100191470 growth-regulating factor 6 growth-regulating factor 6 growth-regulating factor 6-like growth-regulating factor 6 growth-regulating factor 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260890 100853530 816815 829930 100807080 100818860 103862578 103858126 7497735 7464777 25482044 121202961 107938334 125584397 106407512 102618741 101252681 101244049 102582107 102595967 107764760 107808379 9268363 4333990 100285734 100191470 123090965 123087001 123447656 8060535 100833132
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