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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SPCH   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   SPCH2   transcription factor SPEECHLESS-like 
 bra-r.6   103844802   transcription factor SPEECHLESS 
 bra-r.6   103852045   transcription factor SPEECHLESS 
 ghi-r.1   107947261   transcription factor SPEECHLESS 
 ghi-r.1   107942308   transcription factor SPEECHLESS 
 sly-u.5   101256653   transcription factor SPEECHLESS 
 nta-r.1   107765572   transcription factor SPEECHLESS-like 
 nta-r.1   107784398   transcription factor SPEECHLESS-like 

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Top 50 coexpressed genes to SPCH (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPCH (ath-u.5 coexpression data)

CoexMap"100262241"


vviLOC100262241 | Entrez gene ID : 100262241      
Species ath gma bra ghi sly nta hvu tae sbi vvi zma bdi cre ppo osa mtr cit bna sot
Paralog 1 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi04016 [list] [network] MAPK signaling pathway - plant (152 genes)
GO BP
GO:0010052 [list] [network] guard cell differentiation  (16 genes)  IEA  
GO:0010374 [list] [network] stomatal complex development  (16 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (218 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (449 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (925 genes)  IEA  
Protein XP_002267745.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1,  cysk 1  (predict for XP_002267745.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002267745.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
SPCH
gma-u.5
for
SPCH2
bra-r.6
for
103844802
bra-r.6
for
103852045
ghi-r.1
for
107947261
ghi-r.1
for
107942308
sly-u.5
for
101256653
nta-r.1
for
107765572
nta-r.1
for
107784398


Ortholog ID: 5184
Species ath gma gma bra bra ghi ghi sly nta nta
Symbol SPCH SPCH2 SPCH1 LOC103844802 LOC103852045 LOC107947261 LOC107942308 LOC101256653 LOC107765572 LOC107784398
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor SPEECHLESS-like transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835402 100808130 100777437 103844802 103852045 107947261 107942308 101256653 107765572 107784398
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