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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100264561   probable serine/threonine-protein kinase At1g54610 
 vvi-u.5   100259144   probable serine/threonine-protein kinase At1g09600 
 vvi-u.5   100240938   probable serine/threonine-protein kinase At1g54610 
 ath-u.5   AT5G50860   Protein kinase superfamily protein 
 ath-u.5   AT1G09600   Protein kinase superfamily protein 
 gma-u.5   100790750   probable serine/threonine-protein kinase At1g54610 
 gma-u.5   100789359   probable serine/threonine-protein kinase At1g54610 
 ppo-u.5   18098344   probable serine/threonine-protein kinase At1g09600 
 ppo-u.5   18098892   probable serine/threonine-protein kinase At1g54610 
 mtr-u.5   11446121   probable serine/threonine-protein kinase At1g54610 
 mtr-u.5   11431162   probable serine/threonine-protein kinase At1g54610 
 mtr-u.5   11422341   probable serine/threonine-protein kinase At1g54610 
 sly-u.5   101263252   probable serine/threonine-protein kinase At1g09600 
 sly-u.5   101263004   probable serine/threonine-protein kinase At1g54610 
 sly-u.5   101259948   probable serine/threonine-protein kinase At1g09600 
 osa-u.5   4325730   probable serine/threonine-protein kinase At1g54610 
 osa-u.5   4332836   probable serine/threonine-protein kinase At1g54610 
 osa-u.5   4344222   probable serine/threonine-protein kinase At1g54610 
 zma-u.5   103647921   probable serine/threonine-protein kinase At1g54610 
 zma-u.5   103640990   probable serine/threonine-protein kinase At1g09600 
 zma-u.5   100281653   uncharacterized LOC100281653 

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Top 50 coexpressed genes to 100264561 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100264561 (vvi-u.5 coexpression data)

CoexMap"100265500"


vviLOC100265500 | Entrez gene ID : 100265500      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II  (24 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (1262 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (60 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (18 genes)  IEA  
GO:0004693 [list] [network] cyclin-dependent protein serine/threonine kinase activity  (23 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
Protein XP_010645923.1 [sequence] [blastp]
XP_010645924.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_010645923.1)
nucl 10  (predict for XP_010645924.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010645923.1)
other 9  (predict for XP_010645924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100264561
vvi-u.5
for
100259144
vvi-u.5
for
100240938
ath-u.5
for
AT5G50860
ath-u.5
for
AT1G09600
gma-u.5
for
100790750
gma-u.5
for
100789359
ppo-u.5
for
18098344
ppo-u.5
for
18098892
mtr-u.5
for
11446121
mtr-u.5
for
11431162
mtr-u.5
for
11422341
sly-u.5
for
101263252
sly-u.5
for
101263004
sly-u.5
for
101259948
osa-u.5
for
4325730
osa-u.5
for
4332836
osa-u.5
for
4344222
zma-u.5
for
103647921
zma-u.5
for
103640990
zma-u.5
for
100281653


Ortholog ID: 331
Species vvi ath ath gma bra ppo mtr ghi ghi cit cit sly sly sot sot nta nta osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC100240938 AT1G33770 AT5G50860 LOC100807756 LOC103838727 LOC7454750 LOC11438621 LOC107893250 LOC107899141 LOC102625882 LOC102613607 LOC101249862 LOC101251148 LOC102584080 LOC102581857 LOC107832843 LOC107767563 LOC4332836 LOC100193551 LOC103627303 LOC123097110 LOC123085888 LOC123405075 LOC123424803 LOC8075363 LOC100842107
Function* probable serine/threonine-protein kinase At1g54610 Protein kinase superfamily protein Protein kinase superfamily protein probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g09600 probable serine/threonine-protein kinase At1g54610 putative serine/threonine-protein kinase At1g54610 putative serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 uncharacterized LOC100193551 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr01230 Biosynthesis of amino acids 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma00040 Pentose and glucuronate interconversions 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00513 Various types of N-glycan biosynthesis 2
hvu04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100240938 840268 835158 100807756 103838727 7454750 11438621 107893250 107899141 102625882 102613607 101249862 101251148 102584080 102581857 107832843 107767563 4332836 100193551 103627303 123097110 123085888 123405075 123424803 8075363 100842107
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