Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100265801   carbon catabolite repressor protein 4 homolog 1 
 vvi-r.5   100265801   carbon catabolite repressor protein 4 homolog 1 
 vvi-m.5   100265801   carbon catabolite repressor protein 4 homolog 1 
 ath-u.5   AT3G58560   DNAse I-like superfamily protein 
 ath-u.5   AT3G58580   DNAse I-like superfamily protein 
 gma-u.5   100808935   carbon catabolite repressor protein 4 homolog 1 
 gma-u.5   100775270   carbon catabolite repressor protein 4 homolog 1 
 gma-u.5   100819402   carbon catabolite repressor protein 4 homolog 1 
 ppo-u.5   7469907   carbon catabolite repressor protein 4 homolog 1 
 ppo-u.5   7479509   carbon catabolite repressor protein 4 homolog 1 
 mtr-u.5   25499554   carbon catabolite repressor protein 4 homolog 1 
 mtr-u.5   25483567   carbon catabolite repressor protein 4 homolog 2 
 sly-u.5   101255473   carbon catabolite repressor protein 4 homolog 1-like 
 sly-u.5   101256818   carbon catabolite repressor protein 4 homolog 1 
 osa-u.5   4331740   carbon catabolite repressor protein 4 homolog 1 
 osa-u.5   4348610   carbon catabolite repressor protein 4 homolog 1 
 zma-u.5   100280629   CCR4-NOT transcription complex subunit 6 
 zma-u.5   100279717   uncharacterized LOC100279717 
 zma-u.5   100279626   uncharacterized LOC100279626 

close


Top 50 coexpressed genes to 100265801 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100265801 (vvi-u.5 coexpression data)

CoexMap"100265801"


vviLOC100265801 | Entrez gene ID : 100265801      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03018 [list] [network] RNA degradation (97 genes)
GO BP
GO:0000289 [list] [network] nuclear-transcribed mRNA poly(A) tail shortening  (6 genes)  IEA  
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (23 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (10 genes)  IEA  
Protein XP_002280990.1 [sequence] [blastp]
XP_010653857.1 [sequence] [blastp]
XP_010653858.1 [sequence] [blastp]
XP_059595266.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_002280990.1)
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_010653857.1)
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_010653858.1)
chlo 4,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_059595266.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002280990.1)
other 7  (predict for XP_010653857.1)
other 7  (predict for XP_010653858.1)
other 7  (predict for XP_059595266.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100265801
vvi-r.5
for
100265801
vvi-m.5
for
100265801
ath-u.5
for
AT3G58560
ath-u.5
for
AT3G58580
gma-u.5
for
100808935
gma-u.5
for
100775270
gma-u.5
for
100819402
ppo-u.5
for
7469907
ppo-u.5
for
7479509
mtr-u.5
for
25499554
mtr-u.5
for
25483567
sly-u.5
for
101255473
sly-u.5
for
101256818
osa-u.5
for
4331740
osa-u.5
for
4348610
zma-u.5
for
100280629
zma-u.5
for
100279717
zma-u.5
for
100279626


Ortholog ID: 3819
Species vvi ath ath gma gma bra bra ppo ppo mtr mtr ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC100265801 AT3G58560 AT3G58580 LOC100775270 LOC100819402 LOC103830166 LOC103830169 LOC7469907 LOC7479509 LOC25483567 LOC25499554 LOC107891241 LOC107922222 LOC106418709 LOC106353185 LOC102615682 LOC101255473 LOC101256818 LOC102601337 LOC102598581 LOC107759403 LOC107777079 LOC4348610 LOC4331740 LOC100280629 LOC100279626 LOC123043896 LOC123180866 LOC123429162 LOC8066931 LOC110429948 LOC100820928 CHLRE_11g475900v5
Function* carbon catabolite repressor protein 4 homolog 1 DNAse I-like superfamily protein DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 2 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 2 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 2 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 CCR4-NOT transcription complex subunit 6 uncharacterized LOC100279626 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1 carbon catabolite repressor protein 4 homolog 1-like carbon catabolite repressor protein 4 homolog 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 6
gma03015 mRNA surveillance pathway 3
gma04382 Cornified envelope formation 3
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04120 Ubiquitin mediated proteolysis 2
gma00260 Glycine, serine and threonine metabolism 2
gma00460 Cyanoamino acid metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 6
ppo04142 Lysosome 5
ppo05100 Bacterial invasion of epithelial cells 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 7
ppo03420 Nucleotide excision repair 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03050 Proteasome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi04146 Peroxisome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi04146 Peroxisome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03050 Proteasome 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04144 Endocytosis 3
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 5
sot04120 Ubiquitin mediated proteolysis 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03083 Polycomb repressive complex 3
sot04712 Circadian rhythm - plant 3
sot03018 RNA degradation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta00900 Terpenoid backbone biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma03018 RNA degradation 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03018 RNA degradation 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03018 RNA degradation 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03018 RNA degradation 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 3
cre03040 Spliceosome 2
cre03015 mRNA surveillance pathway 2
cre04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100265801 825025 825027 100775270 100819402 103830166 103830169 7469907 7479509 25483567 25499554 107891241 107922222 106418709 106353185 102615682 101255473 101256818 102601337 102598581 107759403 107777079 4348610 4331740 100280629 100279626 123043896 123180866 123429162 8066931 110429948 100820928 5727565
The preparation time of this page was 0.1 [sec].