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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   109941997   protein LATERAL ROOT PRIMORDIUM 1 
 zma-u.5   100857065   protein LATERAL ROOT PRIMORDIUM 1 
 osa-u.5   4325404   protein LATERAL ROOT PRIMORDIUM 1 
 osa-u.5   9271471   protein LATERAL ROOT PRIMORDIUM 1 
 ath-u.5   LRP1   Lateral root primordium (LRP) protein-like protein 
 gma-u.5   100817745   protein LATERAL ROOT PRIMORDIUM 1 
 gma-u.5   100816514   protein LATERAL ROOT PRIMORDIUM 1 
 gma-u.5   100815750   protein LATERAL ROOT PRIMORDIUM 1 
 sly-u.5   101254271   protein LATERAL ROOT PRIMORDIUM 1 
 vvi-u.5   100251674   protein LATERAL ROOT PRIMORDIUM 1 
 vvi-u.5   100246345   protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5   7475019   protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5   7489341   protein LATERAL ROOT PRIMORDIUM 1 
 mtr-u.5   11420597   protein LATERAL ROOT PRIMORDIUM 1 
 mtr-u.5   11432347   protein LATERAL ROOT PRIMORDIUM 1 

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Top 50 coexpressed genes to 109941997 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109941997 (zma-u.5 coexpression data)

CoexMap"100272637"


zmaLOC100272637 | Entrez gene ID : 100272637      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 2 1 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (256 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein NP_001140570.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for NP_001140570.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001140570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
109941997
zma-u.5
for
100857065
osa-u.5
for
4325404
osa-u.5
for
9271471
ath-u.5
for
LRP1
gma-u.5
for
100817745
gma-u.5
for
100816514
gma-u.5
for
100815750
sly-u.5
for
101254271
vvi-u.5
for
100251674
vvi-u.5
for
100246345
ppo-u.5
for
7475019
ppo-u.5
for
7489341
mtr-u.5
for
11420597
mtr-u.5
for
11432347


Ortholog ID: 3619
Species zma zma sbi osa osa tae tae hvu hvu bdi bdi ath gma gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna sot cit nta nta
Symbol LOC100857065 LOC109941997 LOC8077373 LOC4325404 LOC9271471 LOC123181855 LOC123072548 LOC123439876 LOC123445547 LOC100841519 LOC100823373 LRP1 LOC100817745 LOC100777812 LOC101254271 LOC103850822 LOC103846647 LOC100251674 LOC100246345 LOC7489341 LOC7475019 LOC11432347 LOC11420597 LOC107943439 LOC107953174 LOC106430865 LOC102591261 LOC102610450 LOC107782479 LOC107777407
Function* protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1-like protein LATERAL ROOT PRIMORDIUM 1-like uncharacterized LOC100841519 protein LATERAL ROOT PRIMORDIUM 1 Lateral root primordium (LRP) protein-like protein protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1-like protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1-like protein LATERAL ROOT PRIMORDIUM 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00052 Galactose metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi01200 Carbon metabolism 3
vvi00053 Ascorbate and aldarate metabolism 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 2
mtr01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 3
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100857065 109941997 8077373 4325404 9271471 123181855 123072548 123439876 123445547 100841519 100823373 831108 100817745 100777812 101254271 103850822 103846647 100251674 100246345 7489341 7475019 11432347 11420597 107943439 107953174 106430865 102591261 102610450 107782479 107777407
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