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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272787   uncharacterized LOC100272787 
 zma-r.6   100272787   uncharacterized LOC100272787 
 zma-m.5   100272787   uncharacterized LOC100272787 
 osa-u.5   4333096   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ath-u.5   CLPP6   CLP protease proteolytic subunit 6 
 gma-u.5   100799710   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 gma-u.5   100796744   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 sly-u.5   543966   clp-like energy-dependent protease 
 vvi-u.5   100852857   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ppo-u.5   7469984   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 ppo-u.5   7464042   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 
 mtr-u.5   11412973   ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 

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Top 50 coexpressed genes to 100272787 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272787 (zma-u.5 coexpression data)

CoexMap"100272787"


zmaLOC100272787 | Entrez gene ID : 100272787    
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (13 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (36 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (139 genes)  IEA  
Protein NP_001140712.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001140712.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001140712.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272787
zma-r.6
for
100272787
zma-m.5
for
100272787
osa-u.5
for
4333096
ath-u.5
for
CLPP6
gma-u.5
for
100799710
gma-u.5
for
100796744
sly-u.5
for
543966
vvi-u.5
for
100852857
ppo-u.5
for
7469984
ppo-u.5
for
7464042
mtr-u.5
for
11412973


Ortholog ID: 7791
Species zma sbi osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100272787 LOC8056407 LOC4333096 LOC100415860 LOC123085952 LOC123448508 LOC100832682 CLPP6 LOC100796744 LOC100799710 LOC543966 LOC103836208 LOC103843228 LOC100852857 LOC7464042 LOC7469984 LOC11412973 LOC107886985 LOC107898767 LOC106415400 LOC106362167 LOC102589998 LOC102614581 LOC107801881 LOC107811365 CHLRE_06g299650v5
Function* uncharacterized LOC100272787 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic CLP protease proteolytic subunit 6 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic clp-like energy-dependent protease ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi00561 Glycerolipid metabolism 2
bdi00566 Sulfoquinovose metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00785 Lipoic acid metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03010 Ribosome 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo03010 Ribosome 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi03010 Ribosome 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 4
cit00900 Terpenoid backbone biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272787 8056407 4333096 100415860 123085952 123448508 100832682 837719 100796744 100799710 543966 103836208 103843228 100852857 7464042 7469984 11412973 107886985 107898767 106415400 106362167 102589998 102614581 107801881 107811365 5716994
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