ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100272790	uncharacterized LOC100272790
zma-r.6	100272790	uncharacterized LOC100272790
zma-m.5	100272790	uncharacterized LOC100272790
zma-u.5	103639542	fatty acyl-CoA reductase 2, chloroplastic
zma-u.5	103643196	fatty acyl-CoA reductase 1
zma-u.5	100285021	male sterility protein 2
osa-u.5	4335559	fatty acyl-CoA reductase 1
ath-u.5	FAR1	fatty acid reductase 1
gma-u.5	100805776	fatty acyl-CoA reductase 3
sly-u.5	101260757	fatty acyl-CoA reductase 2, chloroplastic-like
sly-u.5	101260469	fatty acyl-CoA reductase 2, chloroplastic-like
vvi-u.5	100259719	fatty acyl-CoA reductase 3
ppo-u.5	7479040	fatty acyl-CoA reductase 3
ppo-u.5	7474948	fatty acyl-CoA reductase 3
mtr-u.5	11406049	fatty acyl-CoA reductase 3

Annotation

functional annotation

KEGG

zma00073 [list] [network] Cutin, suberine and wax biosynthesis (35 genes)

zma04146 [list] [network] Peroxisome (106 genes)

GO BP

GO:0010345 [list] [network] suberin biosynthetic process	(5 genes)	IEA
GO:0035336 [list] [network] long-chain fatty-acyl-CoA metabolic process	(5 genes)	IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(6389 genes)

IEA

GO MF

GO:0080019 [list] [network] alcohol-forming very long-chain fatty acyl-CoA reductase activity

(5 genes)

IEA

Protein

NP_001140715.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1

(predict for NP_001140715.1)

Subcellular
localization
TargetP

other 6

(predict for NP_001140715.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100272790	zma-r.6 for 100272790	zma-m.5 for 100272790	zma-u.5 for 103639542	zma-u.5 for 103643196	zma-u.5 for 100285021	osa-u.5 for 4335559	ath-u.5 for FAR1	gma-u.5 for 100805776	sly-u.5 for 101260757	sly-u.5 for 101260469	vvi-u.5 for 100259719	ppo-u.5 for 7479040	ppo-u.5 for 7474948	mtr-u.5 for 11406049

Ortholog

Ortholog ID: 138

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

FAR4

Function^*

fatty acyl-CoA reductase 1

male sterility protein 2

fatty acyl-CoA reductase 1

fatty acyl-CoA reductase 2, chloroplastic

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 1-like

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 1

fatty acid reductase 4

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 3

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 2-like

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	3
zma00910	Nitrogen metabolism	2
zma00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	4
sbi04075	Plant hormone signal transduction	2
sbi00940	Phenylpropanoid biosynthesis	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	5
osa00071	Fatty acid degradation	4
osa01212	Fatty acid metabolism	4
osa03018	RNA degradation	3
osa00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	5
tae00073	Cutin, suberine and wax biosynthesis	3
tae04146	Peroxisome	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2
ath02010	ABC transporters	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	4
sly04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	4
ppo00062	Fatty acid elongation	3
ppo04626	Plant-pathogen interaction	3
ppo00564	Glycerophospholipid metabolism	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	2
ppo00941	Flavonoid biosynthesis	2
ppo00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	5
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	3
bna00073	Cutin, suberine and wax biosynthesis	2
bna04146	Peroxisome	2
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	4
nta01212	Fatty acid metabolism	3
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03018	RNA degradation	3

Expression

Expression pattern

Entrez Gene ID^*

103643196

100285021

8063746

8072774

107278422

123084801

123172362

123412496

100827426

100822349

823579

100788994

101262598

101255436

103830063

100259719

7479040

7479041

25483583

107932424

107889164

106361089

106356741

102593077

102617900

102627670

107765773

107819278

66052839

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100272790 (zma-u.5 coexpression data)

Top 50 enrichment test to 100272790 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	1	1	1	2	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100272790 (zma-u.5 coexpression data)

Top 50 enrichment test to 100272790 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**