ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100273042	LisH and RanBPM domains containing protein
zma-r.6	100273042	LisH and RanBPM domains containing protein
zma-u.5	103633279	protein GID8 homolog
sbi-r.1	8085238	glucose-induced degradation protein 8 homolog
osa-u.5	4332176	protein GID8 homolog
tae-r.2	123073682	protein GID8 homolog
tae-r.2	123068273	protein GID8 homolog
tae-r.2	123059836	protein GID8 homolog
hvu-r.1	123439175	protein GID8 homolog
hvu-r.1	123449216	protein GID8 homolog
bdi-r.1	100833735	protein GID8 homolog
ath-u.5	AT1G61150	LisH and RanBPM domains containing protein
gma-u.5	100820568	protein GID8 homolog
gma-u.5	100787810	protein GID8 homolog
sly-u.5	101263084	protein GID8 homolog
bra-r.6	103849634	protein GID8 homolog
bra-r.6	103830392	protein GID8 homolog
vvi-u.5	100260761	protein GID8 homolog
ppo-u.5	7495255	protein GID8 homolog
ppo-u.5	7490806	protein GID8 homolog
mtr-u.5	11430368	protein GID8 homolog
ghi-r.1	107913981	protein GID8 homolog
ghi-r.1	107924905	protein GID8 homolog
ghi-r.1	107937740	protein GID8 homolog
bna-r.1	106430429	protein GID8 homolog
bna-r.1	106396959	protein GID8 homolog
bna-r.1	106422397	protein GID8 homolog
sot-r.1	102578849	glucose-induced degradation protein 8 homolog
sot-r.1	102606412	glucose-induced degradation protein 8 homolog
cit-r.1	102617031	protein GID8 homolog
nta-r.1	107821253	protein GID8 homolog
nta-r.1	107795816	protein GID8 homolog
nta-r.1	107782128	protein GID8 homolog
cre-r.1	CHLRE_01g029050v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4389 genes)

IEA

Protein

NP_001140963.1 [sequence] [blastp]
XP_023156727.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto_nucl 4, cyto 4, nucl 2, cysk_nucl 1, plas 1	(predict for NP_001140963.1)
chlo 5, mito 2, nucl 1, cyto_mito 1, cysk_nucl 1	(predict for XP_023156727.1)

Subcellular
localization
TargetP

other 6	(predict for NP_001140963.1)
other 6	(predict for XP_023156727.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100273042	zma-r.6 for 100273042	zma-u.5 for 103633279	sbi-r.1 for 8085238	osa-u.5 for 4332176	tae-r.2 for 123073682	tae-r.2 for 123068273	tae-r.2 for 123059836	hvu-r.1 for 123439175	hvu-r.1 for 123449216	bdi-r.1 for 100833735	ath-u.5 for AT1G61150	gma-u.5 for 100820568	gma-u.5 for 100787810	sly-u.5 for 101263084	bra-r.6 for 103849634	bra-r.6 for 103830392	vvi-u.5 for 100260761	ppo-u.5 for 7495255	ppo-u.5 for 7490806	mtr-u.5 for 11430368	ghi-r.1 for 107913981	ghi-r.1 for 107924905	ghi-r.1 for 107937740	bna-r.1 for 106430429	bna-r.1 for 106396959	bna-r.1 for 106422397	sot-r.1 for 102578849	sot-r.1 for 102606412	cit-r.1 for 102617031	nta-r.1 for 107821253	nta-r.1 for 107795816	nta-r.1 for 107782128	cre-r.1 for CHLRE_01g029050v5

Ortholog

Ortholog ID: 4474

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

LisH and RanBPM domains containing protein

protein GID8 homolog

glucose-induced degradation protein 8 homolog

protein GID8 homolog

LisH and RanBPM domains containing protein

protein GID8 homolog

glucose-induced degradation protein 8 homolog

protein GID8 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma03008	Ribosome biogenesis in eukaryotes	2
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	3
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	9
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03050	Proteasome	8
ath04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	3
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	3
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	6
bna04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta04120	Ubiquitin mediated proteolysis	2
nta00020	Citrate cycle (TCA cycle)	2
nta00270	Cysteine and methionine metabolism	2
nta00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta00270	Cysteine and methionine metabolism	2
nta00920	Sulfur metabolism	2
nta04122	Sulfur relay system	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	5

Expression

Expression pattern

Entrez Gene ID^*

100273042

103633279

8085238

4332176

123068273

123092853

123098136

123439175

123449216

100833735

842408

100820568

100787810

101263084

103849634

103830392

100260761

7495255

7490806

11430368

107905890

107891790

107888996

106430429

106396959

106422397

102578849

102606412

102617031

107821253

107795816

107777614

5715338

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100273042 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273042 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	3	2	1	1	2	1	2	1	2	1	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100273042 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273042 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**