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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273340   Glycine cleavage system H protein 2 mitochondrial 
 zma-r.6   100273340   Glycine cleavage system H protein 2 mitochondrial 
 zma-u.5   103638939   glycine cleavage system H protein 2, mitochondrial 
 zma-u.5   541947   glycine cleavage system H protein, mitochondrial 
 zma-u.5   100286311   glycine cleavage system H protein 1 
 osa-u.5   4349114   glycine cleavage system H protein, mitochondrial 
 osa-u.5   4341790   glycine cleavage system H protein 2, mitochondrial 
 osa-u.5   4328441   glycine cleavage system H protein 2, mitochondrial 
 ath-u.5   AT2G35120   Single hybrid motif superfamily protein 
 ath-u.5   GDCH   glycine decarboxylase complex H 
 ath-u.5   AT1G32470   Single hybrid motif superfamily protein 
 gma-u.5   100785811   glycine cleavage system H protein, mitochondrial 
 gma-u.5   100792708   glycine cleavage system H protein, mitochondrial-like 
 gma-u.5   100305815   glycine cleavage system H protein 2-like 
 sly-u.5   ADH11A4a   glycine cleavage system H protein, mitochondrial 
 sly-u.5   101244882   glycine cleavage system H protein, mitochondrial 
 sly-u.5   101258615   glycine cleavage system H protein 2, mitochondrial 
 vvi-u.5   100265691   glycine cleavage system H protein 2, mitochondrial 
 vvi-u.5   100259229   glycine cleavage system H protein, mitochondrial 
 vvi-u.5   100252595   glycine cleavage system H protein 2, mitochondrial 
 ppo-u.5   7481801   glycine cleavage system H protein 2, mitochondrial 
 ppo-u.5   7453995   glycine cleavage system H protein 2, mitochondrial 
 ppo-u.5   18096946   glycine cleavage system H protein 3, mitochondrial 
 mtr-u.5   11433975   glycine cleavage system H protein, mitochondrial 
 mtr-u.5   11443425   glycine cleavage system H protein 2, mitochondrial 

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Top 50 coexpressed genes to 100273340 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273340 (zma-u.5 coexpression data)

CoexMap"100273340"


zmaLOC100273340 | Entrez gene ID : 100273340      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00260 [list] [network] Glycine, serine and threonine metabolism (89 genes)
zma00630 [list] [network] Glyoxylate and dicarboxylate metabolism (113 genes)
zma00670 [list] [network] One carbon pool by folate (44 genes)
zma00785 [list] [network] Lipoic acid metabolism (41 genes)
zma01200 [list] [network] Carbon metabolism (344 genes)
GO BP
GO:0019464 [list] [network] glycine decarboxylation via glycine cleavage system  (6 genes)  IEA  
GO:0009249 [list] [network] protein lipoylation  (7 genes)  IEA  
GO CC
GO:0005960 [list] [network] glycine cleavage complex  (7 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (746 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
Protein NP_001141253.1 [sequence] [blastp]
XP_035823686.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 2  (predict for NP_001141253.1)
mito 7,  chlo 2  (predict for XP_035823686.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001141253.1)
mito 8  (predict for XP_035823686.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273340
zma-r.6
for
100273340
zma-u.5
for
103638939
zma-u.5
for
541947
zma-u.5
for
100286311
osa-u.5
for
4349114
osa-u.5
for
4341790
osa-u.5
for
4328441
ath-u.5
for
AT2G35120
ath-u.5
for
GDCH
ath-u.5
for
AT1G32470
gma-u.5
for
100785811
gma-u.5
for
100792708
gma-u.5
for
100305815
sly-u.5
for
ADH11A4a
sly-u.5
for
101244882
sly-u.5
for
101258615
vvi-u.5
for
100265691
vvi-u.5
for
100259229
vvi-u.5
for
100252595
ppo-u.5
for
7481801
ppo-u.5
for
7453995
ppo-u.5
for
18096946
mtr-u.5
for
11433975
mtr-u.5
for
11443425


Ortholog ID: 1376
Species zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit cit nta nta cre
Symbol LOC100286311 LOC103638939 LOC8054115 LOC8077176 LOC4341790 LOC4349114 LOC123145544 LOC543355 LOC123401106 LOC123403997 LOC100824105 LOC100828497 AT2G35120 GDCH LOC100792708 LOC100796561 LOC101258615 LOC101244882 LOC103833647 LOC103857558 LOC100259229 LOC100252595 LOC7453995 LOC18096946 LOC11443425 LOC11433975 LOC107912193 LOC107945219 LOC125600518 LOC106418951 LOC102590851 LOC102598788 LOC102611254 LOC102614363 LOC107805221 LOC107772739 CHLRE_06g253350v5
Function* glycine cleavage system H protein 1 glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial Single hybrid motif superfamily protein glycine decarboxylase complex H glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 3, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 3, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein 3, mitochondrial-like glycine cleavage system H protein 3, mitochondrial-like glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein 2, mitochondrial glycine cleavage system H protein, mitochondrial glycine cleavage system H protein, mitochondrial-like glycine cleavage system H protein, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00670 One carbon pool by folate 4
zma00785 Lipoic acid metabolism 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00670 One carbon pool by folate 4
zma00785 Lipoic acid metabolism 4
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00670 One carbon pool by folate 4
sbi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00710 Carbon fixation by Calvin cycle 5
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 5
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 9
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae00710 Carbon fixation by Calvin cycle 5
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00710 Carbon fixation by Calvin cycle 6
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00195 Photosynthesis 4
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00195 Photosynthesis 2
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 11
ath00710 Carbon fixation by Calvin cycle 9
ath00195 Photosynthesis 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 7
gma01200 Carbon metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03060 Protein export 3
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly01230 Biosynthesis of amino acids 5
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00260 Glycine, serine and threonine metabolism 5
bra01230 Biosynthesis of amino acids 4
bra00630 Glyoxylate and dicarboxylate metabolism 4
bra00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00710 Carbon fixation by Calvin cycle 4
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00670 One carbon pool by folate 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo00270 Cysteine and methionine metabolism 6
ppo00670 One carbon pool by folate 6
ppo01240 Biosynthesis of cofactors 5
ppo00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo01200 Carbon metabolism 4
ppo00710 Carbon fixation by Calvin cycle 3
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 8
mtr00710 Carbon fixation by Calvin cycle 6
mtr00010 Glycolysis / Gluconeogenesis 4
mtr00030 Pentose phosphate pathway 4
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi00785 Lipoic acid metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 10
bna00630 Glyoxylate and dicarboxylate metabolism 10
bna00670 One carbon pool by folate 10
bna00785 Lipoic acid metabolism 10
bna01200 Carbon metabolism 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 9
bna00630 Glyoxylate and dicarboxylate metabolism 9
bna00670 One carbon pool by folate 9
bna00785 Lipoic acid metabolism 9
bna01200 Carbon metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 11
sot01230 Biosynthesis of amino acids 7
sot00710 Carbon fixation by Calvin cycle 6
sot00010 Glycolysis / Gluconeogenesis 5
sot00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00940 Phenylpropanoid biosynthesis 2
cit00190 Oxidative phosphorylation 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04144 Endocytosis 3
cre04145 Phagosome 2
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100286311 103638939 8054115 8077176 4341790 4349114 123145544 543355 123401106 123403997 100824105 100828497 818078 818104 100792708 100796561 101258615 101244882 103833647 103857558 100259229 100252595 7453995 18096946 11443425 11433975 107912193 107945219 125600518 106418951 102590851 102598788 102611254 102614363 107805221 107772739 5722154
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