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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273624   uncharacterized LOC100273624 
 zma-r.6   100273624   uncharacterized LOC100273624 
 zma-m.5   100273624   uncharacterized LOC100273624 
 zma-u.5   100282692   Tropinone reductase 
 zma-u.5   100281855   tropinone reductase 2 
 zma-u.5   103652733   tropinone reductase homolog At1g07440 
 osa-u.5   4332377   tropinone reductase homolog At5g06060 
 osa-u.5   4351037   noroxomaritidine/norcraugsodine reductase 
 osa-u.5   4351040   noroxomaritidine/norcraugsodine reductase 
 ath-u.5   AT1G07440   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   AT5G06060   NAD(P)-binding Rossmann-fold superfamily protein 
 gma-u.5   100780806   tropinone reductase 
 gma-u.5   100804946   tropinone reductase homolog At5g06060 
 sly-u.5   101267590   tropinone reductase homolog At5g06060-like 
 sly-u.5   101246642   tropinone reductase homolog At5g06060-like 
 vvi-u.5   104879613   tropinone reductase homolog At5g06060 
 vvi-u.5   100258048   tropinone reductase homolog At2g29290 
 vvi-u.5   100254617   tropinone reductase homolog 
 ppo-u.5   7465086   tropinone reductase homolog At5g06060 
 ppo-u.5   7467561   tropinone reductase homolog At5g06060 
 mtr-u.5   25489333   tropinone reductase homolog At5g06060 
 mtr-u.5   25489334   tropinone reductase homolog At5g06060 
 mtr-u.5   25489336   tropinone reductase homolog At5g06060 

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Top 50 coexpressed genes to 100273624 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273624 (zma-u.5 coexpression data)

CoexMap"100273624"


zmaLOC100273624 | Entrez gene ID : 100273624      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 2 2 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (19 genes)
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1495 genes)  IEA  
Protein NP_001141512.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_pero 3  (predict for NP_001141512.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for NP_001141512.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273624

.
zma-r.6
for
100273624

.
zma-m.5
for
100273624

.
zma-u.5
for
100282692

.
zma-u.5
for
100281855

.
zma-u.5
for
103652733

.
osa-u.5
for
4332377

.
osa-u.5
for
4351037

.
osa-u.5
for
4351040

.
ath-u.5
for
AT1G07440

.
ath-u.5
for
AT5G06060

.
gma-u.5
for
100780806

.
gma-u.5
for
100804946

.
sly-u.5
for
101267590

.
sly-u.5
for
101246642

.
vvi-u.5
for
104879613

.
vvi-u.5
for
100258048

.
vvi-u.5
for
100254617

.
ppo-u.5
for
7465086

.
ppo-u.5
for
7467561

.
mtr-u.5
for
25489333

.
mtr-u.5
for
25489334

.
mtr-u.5
for
25489336

.


Ortholog ID: 288
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT5G06060 LOC100780806 LOC100786456 LOC101265978 LOC101267296 LOC4351037 LOC4351040 LOC100282692 LOC103652733 LOC103838721 LOC103836442 LOC100258048 LOC100254617 LOC7480348 LOC25492542 LOC25492543 LOC123071766 LOC123395159 LOC123395160 LOC121229570 LOC107906578 LOC106381339 LOC106380834 CHLRE_16g682100v5 LOC8082051 LOC8082053 LOC102588942 LOC102595884 LOC102610730 LOC100837913 LOC107767554 LOC107775763
Function* NAD(P)-binding Rossmann-fold superfamily protein tropinone reductase tropinone reductase homolog At5g06060 tropinone reductase homolog At5g06060 tropinone reductase homolog At5g06060 noroxomaritidine/norcraugsodine reductase noroxomaritidine/norcraugsodine reductase Tropinone reductase tropinone reductase homolog At1g07440 tropinone reductase homolog At1g07440 tropinone reductase homolog At1g07450 tropinone reductase homolog At2g29290 tropinone reductase homolog tropinone reductase homolog At2g29290 tropinone reductase homolog At5g06060 tropinone reductase homolog At1g07440 noroxomaritidine/norcraugsodine reductase tropinone reductase homolog At2g29290-like noroxomaritidine/norcraugsodine reductase-like tropinone reductase homolog At5g06060 tropinone reductase homolog At5g06060 tropinone reductase homolog At1g07440-like tropinone reductase homolog At5g06060 uncharacterized protein tropinone reductase homolog At2g29360 tropinone reductase homolog At2g29360 tropinone reductase homolog At2g29260, chloroplastic-like tropinone reductase homolog At5g06060-like tropinone reductase homolog At2g29170-like tropinone reductase homolog At5g06060 tropinone reductase homolog At5g06060 tropinone reductase homolog At5g06060-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
osa00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 3
mtr04070 Phosphatidylinositol signaling system 3
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00350 Tyrosine metabolism 3
tae00360 Phenylalanine metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 14
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 8
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot03010 Ribosome 2
sot00970 Aminoacyl-tRNA biosynthesis 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit00960 Tropane, piperidine and pyridine alkaloid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830493 100780806 100786456 101265978 101267296 4351037 4351040 100282692 103652733 103838721 103836442 100258048 100254617 7480348 25492542 25492543 123071766 123395159 123395160 121229570 107906578 106381339 106380834 5717568 8082051 8082053 102588942 102595884 102610730 100837913 107767554 107775763
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