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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273682   uncharacterized LOC100273682 
 zma-r.6   100273682   uncharacterized LOC100273682 
 ath-u.5   EMB2768   Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 
 gma-u.5   100813016   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100795726   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101255211   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100246653   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18105304   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25494107   tyrosine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25491022   tyrosine--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 100273682 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273682 (zma-u.5 coexpression data)

CoexMap"100273682"


zmaLOC100273682 | Entrez gene ID : 100273682      
Species zma ath gma sly vvi ppo mtr sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00970 [list] [network] Aminoacyl-tRNA biosynthesis (101 genes)
GO BP
GO:0006437 [list] [network] tyrosyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (118 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (746 genes)  IEA  
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO MF
GO:0004831 [list] [network] tyrosine-tRNA ligase activity  (3 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein NP_001141566.1 [sequence] [blastp]
XP_020403130.1 [sequence] [blastp]
XP_035820529.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2,  cyto_mito 1  (predict for NP_001141566.1)
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_020403130.1)
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_035820529.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for NP_001141566.1)
mito 7,  chlo 4  (predict for XP_020403130.1)
mito 7,  chlo 4  (predict for XP_035820529.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273682

.
zma-r.6
for
100273682

.
ath-u.5
for
EMB2768

.
gma-u.5
for
100813016

.
gma-u.5
for
100795726

.
sly-u.5
for
101255211

.
vvi-u.5
for
100246653

.
ppo-u.5
for
18105304

.
mtr-u.5
for
25494107

.
mtr-u.5
for
25491022

.


Ortholog ID: 8013
Species ath gma gma sly zma bra vvi ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol EMB2768 LOC100795726 LOC100813016 LOC101255211 LOC100273682 LOC103858981 LOC100246653 LOC18105304 LOC25491022 LOC25494107 LOC123181012 LOC123430775 LOC107928115 LOC107933932 LOC106438948 LOC106387281 CHLRE_13g606050v5 LOC8057469 LOC102604688 LOC102614209 LOC100835648 LOC100832707 LOC107800102 LOC107832553
Function* Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100273682 tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial tyrosine--tRNA ligase, chloroplastic/mitochondrial-like tyrosine--tRNA ligase, chloroplastic/mitochondrial-like tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
cre00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 4
cit00290 Valine, leucine and isoleucine biosynthesis 3
cit00770 Pantothenate and CoA biosynthesis 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821282 100795726 100813016 101255211 100273682 103858981 100246653 18105304 25491022 25494107 123181012 123430775 107928115 107933932 106438948 106387281 5724689 8057469 102604688 102614209 100835648 100832707 107800102 107832553
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