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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100274123   DNA glycosylase superfamily protein 
 zma-r.6   100274123   DNA glycosylase superfamily protein 
 zma-u.5   100194229   DNA glycosylase superfamily protein 
 zma-u.5   100285587   DNA-3-methyladenine glycosylase 1 
 sbi-r.1   8063616   probable DNA-3-methyladenine glycosylase 2 
 sbi-r.1   8083805   putative DNA-3-methyladenine glycosylase YfjP 
 osa-u.5   4339711   alkylbase DNA glycosidase-like protein mag2 
 tae-r.2   123068777   alkylbase DNA glycosidase-like protein mag2 
 tae-r.2   123146647   alkylbase DNA glycosidase-like protein mag2 
 tae-r.2   123148151   alkylbase DNA glycosidase-like protein mag2 
 hvu-r.1   123451759   DNA-3-methyladenine glycosylase 1 
 bdi-r.1   100823568   putative DNA-3-methyladenine glycosylase YfjP 
 bdi-r.1   104582586   probable DNA-3-methyladenine glycosylase 2 
 ath-u.5   AT3G50880   DNA glycosylase superfamily protein 
 ath-u.5   AT1G19480   DNA glycosylase superfamily protein 
 ath-u.5   AT1G75230   DNA glycosylase superfamily protein 
 gma-u.5   100788160   DNA-3-methyladenine glycosylase 1-like 
 gma-u.5   100790760   probable DNA-3-methyladenine glycosylase 2 
 sly-u.5   101266297   alkylbase DNA glycosidase-like protein mag2 
 bra-r.6   103841008   DNA-3-methyladenine glycosylase 1 
 bra-r.6   103872750   DNA-3-methyladenine glycosylase 1 
 bra-r.6   103830656   DNA-3-methyladenine glycosylase 1 
 vvi-u.5   100243712   alkylbase DNA glycosidase-like protein mag2 
 vvi-u.5   100252980   DNA-3-methyladenine glycosylase 1 
 vvi-u.5   100852509   DNA-3-methyladenine glycosylase 1 
 ppo-u.5   7454360   uncharacterized LOC7454360 
 ppo-u.5   7480129   alkylbase DNA glycosidase-like protein mag2 
 ppo-u.5   112326628   uncharacterized LOC112326628 
 mtr-u.5   11416684   probable DNA-3-methyladenine glycosylase 2 
 mtr-u.5   25490192   probable DNA-3-methyladenine glycosylase 2 
 ghi-r.1   107905434   DNA-3-methyladenine glycosylase 
 ghi-r.1   121209717   DNA-3-methyladenine glycosylase 1 
 ghi-r.1   107960425   probable DNA-3-methyladenine glycosylase 2 
 bna-r.1   106451354   DNA-3-methyladenine glycosylase 1 
 bna-r.1   106402190   DNA-3-methyladenine glycosylase 1 
 bna-r.1   106387266   DNA-3-methyladenine glycosylase 1-like 
 sot-r.1   102588134   probable DNA-3-methyladenine glycosylase 2 
 sot-r.1   102594175   probable DNA-3-methyladenine glycosylase 2 
 cit-r.1   102629620   DNA-3-methyladenine glycosylase 1 
 cit-r.1   102613060   alkylbase DNA glycosidase-like protein mag2 
 nta-r.1   107788381   alkylbase DNA glycosidase-like protein mag2 
 nta-r.1   107808572   alkylbase DNA glycosidase-like protein mag2 
 nta-r.1   107805378   DNA-3-methyladenine glycosylase 1 
 cre-r.1   CHLRE_11g476400v5   uncharacterized protein 

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Top 50 coexpressed genes to 100274123 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100274123 (zma-u.5 coexpression data)

CoexMap"100274123"


zmaLOC100274123 | Entrez gene ID : 100274123      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 1 3 1 2 3 2 1 3 3 3 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03410 [list] [network] Base excision repair (53 genes)
GO BP
GO:0006307 [list] [network] DNA alkylation repair  (5 genes)  IEA  
GO:0006285 [list] [network] base-excision repair, AP site formation  (6 genes)  IEA  
GO:0006284 [list] [network] base-excision repair  (35 genes)  IEA  
GO CC
GO:0032993 [list] [network] protein-DNA complex  (158 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0032131 [list] [network] alkylated DNA binding  (3 genes)  IEA  
GO:0043916 [list] [network] DNA-7-methylguanine glycosylase activity  (3 genes)  IEA  
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (12 genes)  IEA  
Protein NP_001141973.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001141973.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001141973.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100274123
zma-r.6
for
100274123
zma-u.5
for
100194229
zma-u.5
for
100285587
sbi-r.1
for
8063616
sbi-r.1
for
8083805
osa-u.5
for
4339711
tae-r.2
for
123068777
tae-r.2
for
123146647
tae-r.2
for
123148151
hvu-r.1
for
123451759
bdi-r.1
for
100823568
bdi-r.1
for
104582586
ath-u.5
for
AT3G50880
ath-u.5
for
AT1G19480
ath-u.5
for
AT1G75230
gma-u.5
for
100788160
gma-u.5
for
100790760
sly-u.5
for
101266297
bra-r.6
for
103841008
bra-r.6
for
103872750
bra-r.6
for
103830656
vvi-u.5
for
100243712
vvi-u.5
for
100252980
vvi-u.5
for
100852509
ppo-u.5
for
7454360
ppo-u.5
for
7480129
ppo-u.5
for
112326628
mtr-u.5
for
11416684
mtr-u.5
for
25490192
ghi-r.1
for
107905434
ghi-r.1
for
121209717
ghi-r.1
for
107960425
bna-r.1
for
106451354
bna-r.1
for
106402190
bna-r.1
for
106387266
sot-r.1
for
102588134
sot-r.1
for
102594175
cit-r.1
for
102629620
cit-r.1
for
102613060
nta-r.1
for
107788381
nta-r.1
for
107808572
nta-r.1
for
107805378
cre-r.1
for
CHLRE_11g476400v5


Ortholog ID: 2736
Species zma zma zma sbi sbi osa tae tae tae hvu bdi bdi ath ath ath gma gma sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC100274123 LOC100194229 LOC100285587 LOC8063616 LOC8083805 LOC4339711 LOC123068777 LOC123148151 LOC123183174 LOC123451759 LOC100823568 LOC104582586 AT3G50880 AT1G19480 AT1G75230 LOC100788160 LOC100790760 LOC101266297 LOC103841008 LOC103872750 LOC103830656 LOC100243712 LOC100252980 LOC100852509 LOC7454360 LOC7480129 LOC112326628 LOC11416684 LOC25490192 LOC107960425 LOC107957572 LOC107909405 LOC106402190 LOC106387266 LOC106353672 LOC102588134 LOC102594175 LOC102629620 LOC102613060 LOC107788381 LOC107808572 LOC107789650 CHLRE_11g476400v5
Function* DNA glycosylase superfamily protein DNA glycosylase superfamily protein DNA-3-methyladenine glycosylase 1 probable DNA-3-methyladenine glycosylase 2 putative DNA-3-methyladenine glycosylase YfjP alkylbase DNA glycosidase-like protein mag2 alkylbase DNA glycosidase-like protein mag2 alkylbase DNA glycosidase-like protein mag2 alkylbase DNA glycosidase-like protein mag2 DNA-3-methyladenine glycosylase 1 putative DNA-3-methyladenine glycosylase YfjP probable DNA-3-methyladenine glycosylase 2 DNA glycosylase superfamily protein DNA glycosylase superfamily protein DNA glycosylase superfamily protein DNA-3-methyladenine glycosylase 1-like probable DNA-3-methyladenine glycosylase 2 alkylbase DNA glycosidase-like protein mag2 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1 alkylbase DNA glycosidase-like protein mag2 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1 uncharacterized LOC7454360 alkylbase DNA glycosidase-like protein mag2 uncharacterized LOC112326628 probable DNA-3-methyladenine glycosylase 2 probable DNA-3-methyladenine glycosylase 2 probable DNA-3-methyladenine glycosylase 2 probable DNA-3-methyladenine glycosylase 2 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1-like DNA-3-methyladenine glycosylase 1-like probable DNA-3-methyladenine glycosylase 2 probable DNA-3-methyladenine glycosylase 2 DNA-3-methyladenine glycosylase 1 alkylbase DNA glycosidase-like protein mag2 alkylbase DNA glycosidase-like protein mag2 alkylbase DNA glycosidase-like protein mag2 DNA-3-methyladenine glycosylase 1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00543 Exopolysaccharide biosynthesis 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00500 Starch and sucrose metabolism 2
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03410 Base excision repair 2
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03410 Base excision repair 2
ppo00790 Folate biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 3
bna03410 Base excision repair 2
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
bna04146 Peroxisome 2
bna04141 Protein processing in endoplasmic reticulum 2
bna00310 Lysine degradation 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04144 Endocytosis 2
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 3
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta03410 Base excision repair 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100274123 100194229 100285587 8063616 8083805 4339711 123068777 123148151 123183174 123451759 100823568 104582586 824252 838533 843860 100788160 100790760 101266297 103841008 103872750 103830656 100243712 100252980 100852509 7454360 7480129 112326628 11416684 25490192 107960425 107957572 107909405 106402190 106387266 106353672 102588134 102594175 102629620 102613060 107788381 107808572 107789650 5722861
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