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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100274167   putative RING zinc finger domain superfamily protein 
 zma-r.6   100274167   putative RING zinc finger domain superfamily protein 
 zma-m.5   100274167   putative RING zinc finger domain superfamily protein 
 zma-u.5   100216754   putative RING zinc finger domain superfamily protein 
 osa-u.5   4332001   probable E3 ubiquitin-protein ligase RHY1A 
 ath-u.5   AT1G49850   RING/U-box superfamily protein 
 gma-u.5   RNF12   RING-H2 finger protein 
 gma-u.5   100814695   probable E3 ubiquitin-protein ligase RHY1A 
 sly-u.5   101244425   RING-H2 finger protein 
 vvi-u.5   100249808   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   18095179   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   18102089   probable E3 ubiquitin-protein ligase RHY1A 
 mtr-u.5   25485358   probable E3 ubiquitin-protein ligase RHY1A 

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Top 50 coexpressed genes to 100274167 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100274167 (zma-u.5 coexpression data)

CoexMap"100274167"


zmaLOC100274167 | Entrez gene ID : 100274167      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (319 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
Protein NP_001142014.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cysk 1,  mito_plas 1  (predict for NP_001142014.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001142014.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100274167
zma-r.6
for
100274167
zma-m.5
for
100274167
zma-u.5
for
100216754
osa-u.5
for
4332001
ath-u.5
for
AT1G49850
gma-u.5
for
RNF12
gma-u.5
for
100814695
sly-u.5
for
101244425
vvi-u.5
for
100249808
ppo-u.5
for
18095179
ppo-u.5
for
18102089
mtr-u.5
for
25485358


Ortholog ID: 7065
Species zma zma sbi osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100216754 LOC100274167 LOC8081858 LOC4332001 LOC123093052 LOC123085014 LOC123449376 LOC100821857 AT1G49850 LOC100814695 RNF12 LOC101244425 LOC103849551 LOC103832912 LOC100249808 LOC18102089 LOC18095179 LOC25485358 LOC107894312 LOC107938392 LOC125609567 LOC106399346 LOC102592559 LOC102616524 LOC107812356 LOC107796169
Function* putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHY1A RING-H2 finger protein RING-H2 finger protein probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin ligase BIG BROTHER-related probable E3 ubiquitin-protein ligase RHY1A putative E3 ubiquitin-protein ligase RHY1A putative E3 ubiquitin-protein ligase RHY1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 5
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01040 Biosynthesis of unsaturated fatty acids 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi04144 Endocytosis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100216754 100274167 8081858 4332001 123093052 123085014 123449376 100821857 841408 100814695 548042 101244425 103849551 103832912 100249808 18102089 18095179 25485358 107894312 107938392 125609567 106399346 102592559 102616524 107812356 107796169
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