ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100276073	uncharacterized LOC100276073
zma-r.6	100276073	uncharacterized LOC100276073
zma-u.5	100193542	uncharacterized LOC100193542
sbi-r.1	8056946	uncharacterized LOC8056946
osa-u.5	4334892	mitochondrial ATP-independent inner membrane protease subunit 2
tae-r.2	123187093	uncharacterized LOC123187093
tae-r.2	123051141	uncharacterized LOC123051141
tae-r.2	123043275	uncharacterized LOC123043275
hvu-r.1	123424432	uncharacterized LOC123424432
bdi-r.1	100823230	uncharacterized LOC100823230
ath-u.5	AT2G31140	Peptidase S24/S26A/S26B/S26C family protein
ath-u.5	AT1G06200	Peptidase S24/S26A/S26B/S26C family protein
gma-u.5	100500100	uncharacterized LOC100500100
gma-u.5	100785852	mitochondrial inner membrane protease subunit 1-like
sly-u.5	101259874	S26 Type I signal peptidase family protein
bra-r.6	103857361	uncharacterized LOC103857361
vvi-u.5	100256678	mitochondrial ATP-independent inner membrane protease subunit 2
ppo-u.5	18096124	uncharacterized LOC18096124
ppo-u.5	7454350	uncharacterized LOC7454350
mtr-u.5	25484260	uncharacterized LOC25484260
mtr-u.5	25484257	uncharacterized LOC25484257
ghi-r.1	107952871	uncharacterized LOC107952871
ghi-r.1	107958646	mitochondrial inner membrane protease subunit 2
ghi-r.1	107955432	mitochondrial inner membrane protease subunit 2
bna-r.1	106387844	uncharacterized LOC106387844
bna-r.1	BNAA10G04140D	uncharacterized BNAA10G04140D
bna-r.1	BNAC08G01690D	uncharacterized BNAC08G01690D
sot-r.1	102597558	uncharacterized LOC102597558
cit-r.1	102614262	uncharacterized LOC102614262
nta-r.1	107821453	mitochondrial ATP-independent inner membrane protease subunit 2-like
nta-r.1	107779203	mitochondrial ATP-independent inner membrane protease subunit 2-like
cre-r.1	CHLRE_16g694703v5	uncharacterized protein

Top 50 coexpressed genes to 100276073 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100276073 (zma-u.5 coexpression data)

CoexMap"100276073"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006465 [list] [network] signal peptide processing

(37 genes)

IEA

GO CC

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity

(139 genes)

IEA

Protein

NP_001143426.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 3, cyto 1, pero 1, nucl_plas 1, golg_plas 1, cyto_pero 1, cysk_plas 1, E.R._plas 1, mito_plas 1

(predict for NP_001143426.1)

Subcellular
localization
TargetP

mito 4

(predict for NP_001143426.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100276073	zma-r.6 for 100276073	zma-u.5 for 100193542	sbi-r.1 for 8056946	osa-u.5 for 4334892	tae-r.2 for 123187093	tae-r.2 for 123051141	tae-r.2 for 123043275	hvu-r.1 for 123424432	bdi-r.1 for 100823230	ath-u.5 for AT2G31140	ath-u.5 for AT1G06200	gma-u.5 for 100500100	gma-u.5 for 100785852	sly-u.5 for 101259874	bra-r.6 for 103857361	vvi-u.5 for 100256678	ppo-u.5 for 18096124	ppo-u.5 for 7454350	mtr-u.5 for 25484260	mtr-u.5 for 25484257	ghi-r.1 for 107952871	ghi-r.1 for 107958646	ghi-r.1 for 107955432	bna-r.1 for 106387844	bna-r.1 for BNAA10G04140D	bna-r.1 for BNAC08G01690D	sot-r.1 for 102597558	cit-r.1 for 102614262	nta-r.1 for 107821453	nta-r.1 for 107779203	cre-r.1 for CHLRE_16g694703v5

Ortholog

Ortholog ID: 5693

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100276073

uncharacterized LOC100193542

uncharacterized LOC8056946

mitochondrial ATP-independent inner membrane protease subunit 2

uncharacterized LOC123187093

uncharacterized LOC123051141

uncharacterized LOC123043275

uncharacterized LOC123424432

uncharacterized LOC100823230

Peptidase S24/S26A/S26B/S26C family protein

uncharacterized LOC100500100

mitochondrial inner membrane protease subunit 1-like

S26 Type I signal peptidase family protein

uncharacterized LOC103857361

mitochondrial ATP-independent inner membrane protease subunit 2

uncharacterized LOC18096124

uncharacterized LOC7454350

uncharacterized LOC25484260

uncharacterized LOC25484257

uncharacterized LOC107952871

mitochondrial inner membrane protease subunit 2

uncharacterized LOC107954609

uncharacterized BNAC08G01690D

uncharacterized BNAC05G04270D

mitochondrial inner membrane protease subunit 1

uncharacterized LOC102597558

uncharacterized LOC102614262

mitochondrial ATP-independent inner membrane protease subunit 2-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6
zma03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	4
sbi03010	Ribosome	4
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae00220	Arginine biosynthesis	2
tae00330	Arginine and proline metabolism	2
tae01230	Biosynthesis of amino acids	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03083	Polycomb repressive complex	3
hvu04120	Ubiquitin mediated proteolysis	3
hvu04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	7
ath00020	Citrate cycle (TCA cycle)	3
ath01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma03010	Ribosome	3
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7
vvi03082	ATP-dependent chromatin remodeling	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	3
ppo03060	Protein export	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	3
bna00240	Pyrimidine metabolism	3
bna01232	Nucleotide metabolism	3
bna01240	Biosynthesis of cofactors	3
bna04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	4
bna01240	Biosynthesis of cofactors	4
bna00230	Purine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit03008	Ribosome biogenesis in eukaryotes	2
cit00190	Oxidative phosphorylation	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta03040	Spliceosome	3
nta03020	RNA polymerase	2
nta04146	Peroxisome	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
cre01240	Biosynthesis of cofactors	3
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100276073

100193542

8056946

4334892

123187093

123051141

123043275

123424432

100823230

817670

837129

100500100

100785852

101259874

103857361

100256678

18096124

7454350

25484260

25484257

107952871

107958646

107954609

106365704

106400836

106387843

102597558

102614262

107821453

107779203

5724914

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	3	1	1	2	2	1	1	1	2	2	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100276073 (zma-u.5 coexpression data)

Top 50 enrichment test to 100276073 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**