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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100276619   uncharacterized LOC100276619 
 zma-r.6   100276619   uncharacterized LOC100276619 
 sbi-r.1   8068583   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 sbi-r.1   8073405   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 osa-u.5   4330704   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 tae-r.2   123145501   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 tae-r.2   123138243   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 tae-r.2   123128385   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 hvu-r.1   123402021   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bdi-r.1   100837388   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 ath-u.5   PnsB4   NDH dependent flow 6 
 gma-u.5   100800656   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 gma-u.5   100801331   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 sly-u.5   101254767   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bra-r.6   117125684   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bra-r.6   103872680   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bra-r.6   103842686   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 vvi-u.5   100854331   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 vvi-u.5   100854601   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 ppo-u.5   7484743   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 mtr-u.5   25490400   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 ghi-r.1   107949817   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 ghi-r.1   107886148   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bna-r.1   125610249   photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like 
 bna-r.1   106369073   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 bna-r.1   106368883   photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like 
 sot-r.1   102584759   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 cit-r.1   102607245   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 nta-r.1   107794348   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 
 nta-r.1   107776289   photosynthetic NDH subunit of subcomplex B 4, chloroplastic 

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Top 50 coexpressed genes to 100276619 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100276619 (zma-u.5 coexpression data)

CoexMap"100276619"


zmaLOC100276619 | Entrez gene ID : 100276619    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 1 3 1 1 1 2 1 3 2 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (10 genes)  IEA  
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (5 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (153 genes)  IEA  
GO MF
Protein NP_001143837.2 [sequence] [blastp]
XP_008681641.1 [sequence] [blastp]
XP_035823772.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001143837.2)
chlo 4,  nucl 1,  E.R. 1,  cyto 1,  mito 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_008681641.1)
chlo 9  (predict for XP_035823772.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_001143837.2)
other 8  (predict for XP_008681641.1)
chlo 5,  mito 3  (predict for XP_035823772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100276619
zma-r.6
for
100276619
sbi-r.1
for
8068583
sbi-r.1
for
8073405
osa-u.5
for
4330704
tae-r.2
for
123145501
tae-r.2
for
123138243
tae-r.2
for
123128385
hvu-r.1
for
123402021
bdi-r.1
for
100837388
ath-u.5
for
PnsB4
gma-u.5
for
100800656
gma-u.5
for
100801331
sly-u.5
for
101254767
bra-r.6
for
117125684
bra-r.6
for
103872680
bra-r.6
for
103842686
vvi-u.5
for
100854331
vvi-u.5
for
100854601
ppo-u.5
for
7484743
mtr-u.5
for
25490400
ghi-r.1
for
107949817
ghi-r.1
for
107886148
bna-r.1
for
125610249
bna-r.1
for
106369073
bna-r.1
for
106368883
sot-r.1
for
102584759
cit-r.1
for
102607245
nta-r.1
for
107794348
nta-r.1
for
107776289


Ortholog ID: 7806
Species zma sbi sbi osa tae tae tae hvu bdi ath gma gma sly bra bra bra vvi vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100276619 LOC8068583 LOC8073405 LOC4330704 LOC123145501 LOC123138243 LOC123128385 LOC123402021 LOC100837388 PnsB4 LOC100800656 LOC100801331 LOC101254767 LOC117125684 LOC103872680 LOC103842686 LOC100854331 LOC100854601 LOC7484743 LOC25490400 LOC107949817 LOC107886148 LOC125610249 LOC106369073 LOC106368883 LOC102584759 LOC102607245 LOC107794348 LOC107776289
Function* uncharacterized LOC100276619 photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic NDH dependent flow 6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic photosynthetic NDH subunit of subcomplex B 4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01200 Carbon metabolism 4
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 10
hvu00710 Carbon fixation by Calvin cycle 7
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00260 Glycine, serine and threonine metabolism 3
hvu00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00260 Glycine, serine and threonine metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00051 Fructose and mannose metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00710 Carbon fixation by Calvin cycle 5
ppo00195 Photosynthesis 3
ppo00190 Oxidative phosphorylation 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
mtr01200 Carbon metabolism 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00860 Porphyrin metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00630 Glyoxylate and dicarboxylate metabolism 5
sot00710 Carbon fixation by Calvin cycle 5
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 2
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100276619 8068583 8073405 4330704 123145501 123138243 123128385 123402021 100837388 838455 100800656 100801331 101254767 117125684 103872680 103842686 100854331 100854601 7484743 25490400 107949817 107886148 125610249 106369073 106368883 102584759 102607245 107794348 107776289
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