ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100276882	proline-rich family protein
zma-r.6	100276882	proline-rich family protein
sbi-r.1	8056836	proline-rich receptor-like protein kinase PERK8
osa-u.5	4332171	protein transport protein sec31
tae-r.2	123092857	vegetative cell wall protein gp1
tae-r.2	123085239	proline-rich receptor-like protein kinase PERK2
tae-r.2	123098141	vegetative cell wall protein gp1
hvu-r.1	123449221	vegetative cell wall protein gp1-like
hvu-r.1	123450751	vegetative cell wall protein gp1-like
bdi-r.1	100845754	atherin
bdi-r.1	100834652	vegetative cell wall protein gp1
bdi-r.1	100830694	LIM domain-binding protein 3
ath-u.5	AT2G32840	proline-rich family protein
ath-u.5	AT1G04930	hydroxyproline-rich glycoprotein family protein
gma-u.5	100808873	uncharacterized LOC100808873
gma-u.5	100779268	uncharacterized LOC100779268
sly-u.5	101251026	proline-rich receptor-like protein kinase PERK12
bra-r.6	103844198	proline-rich receptor-like protein kinase PERK14
bra-r.6	103867603	uncharacterized LOC103867603
vvi-u.5	100251070	uncharacterized LOC100251070
ppo-u.5	18094992	uncharacterized LOC18094992
mtr-u.5	11443716	uncharacterized LOC11443716
ghi-r.1	107926121	uncharacterized LOC107926121
ghi-r.1	107918568	uncharacterized LOC107918568
bna-r.1	106370971	proline-rich receptor-like protein kinase PERK14
bna-r.1	BNAC05G02940D	uncharacterized BNAC05G02940D
sot-r.1	102599206	mucin-2
cit-r.1	102625547	uncharacterized LOC102625547
nta-r.1	107761084	uncharacterized LOC107761084
nta-r.1	107819196	uncharacterized LOC107819196

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0017053 [list] [network] transcription repressor complex

(4 genes)

IEA

GO MF

Protein

NP_001144057.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_001144057.1)

Subcellular
localization
TargetP

chlo 3, mito 3

(predict for NP_001144057.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100276882	zma-r.6 for 100276882	sbi-r.1 for 8056836	osa-u.5 for 4332171	tae-r.2 for 123092857	tae-r.2 for 123085239	tae-r.2 for 123098141	hvu-r.1 for 123449221	hvu-r.1 for 123450751	bdi-r.1 for 100845754	bdi-r.1 for 100834652	bdi-r.1 for 100830694	ath-u.5 for AT2G32840	ath-u.5 for AT1G04930	gma-u.5 for 100808873	gma-u.5 for 100779268	sly-u.5 for 101251026	bra-r.6 for 103844198	bra-r.6 for 103867603	vvi-u.5 for 100251070	ppo-u.5 for 18094992	mtr-u.5 for 11443716	ghi-r.1 for 107926121	ghi-r.1 for 107918568	bna-r.1 for 106370971	bna-r.1 for BNAC05G02940D	sot-r.1 for 102599206	cit-r.1 for 102625547	nta-r.1 for 107761084	nta-r.1 for 107819196

Ortholog

Ortholog ID: 6823

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

proline-rich family protein

proline-rich receptor-like protein kinase PERK8

protein transport protein sec31

vegetative cell wall protein gp1

proline-rich receptor-like protein kinase PERK2

vegetative cell wall protein gp1

vegetative cell wall protein gp1-like

atherin

vegetative cell wall protein gp1

LIM domain-binding protein 3

proline-rich family protein

hydroxyproline-rich glycoprotein family protein

uncharacterized LOC100808873

uncharacterized LOC100779268

proline-rich receptor-like protein kinase PERK12

proline-rich receptor-like protein kinase PERK14

uncharacterized LOC103867603

uncharacterized LOC100251070

uncharacterized LOC18094992

uncharacterized LOC11443716

uncharacterized LOC107926121

uncharacterized LOC107918568

proline-rich receptor-like protein kinase PERK14

uncharacterized BNAC05G02940D

uncharacterized BNAA05G35110D

mucin-2

uncharacterized LOC102625547

uncharacterized LOC107761084

uncharacterized LOC107819196

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00220	Arginine biosynthesis	8
tae01230	Biosynthesis of amino acids	8
tae01210	2-Oxocarboxylic acid metabolism	4
tae00250	Alanine, aspartate and glutamate metabolism	4
tae00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00220	Arginine biosynthesis	4
tae01230	Biosynthesis of amino acids	4
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00541	Biosynthesis of various nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	6
tae00270	Cysteine and methionine metabolism	3
tae00450	Selenocompound metabolism	3
tae00220	Arginine biosynthesis	3
tae00250	Alanine, aspartate and glutamate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	5
hvu00220	Arginine biosynthesis	4
hvu00250	Alanine, aspartate and glutamate metabolism	3
hvu01240	Biosynthesis of cofactors	2
hvu01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00220	Arginine biosynthesis	4
hvu01230	Biosynthesis of amino acids	4
hvu00250	Alanine, aspartate and glutamate metabolism	3
hvu00190	Oxidative phosphorylation	2
hvu01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4
gma03040	Spliceosome	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly03010	Ribosome	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03015	mRNA surveillance pathway	2
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	2
bna03010	Ribosome	2
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	6
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	7
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
nta01230	Biosynthesis of amino acids	6
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta00950	Isoquinoline alkaloid biosynthesis	2
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100276882

8056836

4332171

123092857

123085239

123098141

123449221

123450751

100845754

100834652

100830694

817845

839377

100808873

100779268

101251026

103844198

103867603

100251070

18094992

11443716

107926121

107918568

106370971

106400900

106451287

102599206

102625547

107761084

107819196

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100276882 (zma-u.5 coexpression data)

Top 50 enrichment test to 100276882 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	1	3	2	3	2	2	1	2	1	1	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100276882 (zma-u.5 coexpression data)

Top 50 enrichment test to 100276882 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**