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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100277110   uncharacterized LOC100277110 
 zma-r.6   100277110   uncharacterized LOC100277110 
 osa-u.5   9271563   armadillo repeat-containing protein LFR-like 
 ath-u.5   LFR   ARM repeat superfamily protein 
 gma-u.5   100814807   armadillo repeat-containing protein LFR 
 gma-u.5   100790539   armadillo repeat-containing protein LFR 
 sly-u.5   101261958   armadillo repeat-containing protein LFR 
 sly-u.5   101257736   armadillo repeat-containing protein LFR 
 vvi-u.5   100240806   armadillo repeat-containing protein LFR 
 ppo-u.5   7467516   armadillo repeat-containing protein LFR 
 mtr-u.5   25482934   armadillo repeat-containing protein LFR 

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Top 50 coexpressed genes to 100277110 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100277110 (zma-u.5 coexpression data)

CoexMap"100277110"


zmaLOC100277110 | Entrez gene ID : 100277110      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (160 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (256 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (427 genes)  IEA  
GO CC
GO:0035060 [list] [network] brahma complex  (1 genes)  IEA  
GO:0016514 [list] [network] SWI/SNF complex  (4 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (217 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (26 genes)  IEA  
Protein NP_001144242.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001144242.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001144242.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100277110

.
zma-r.6
for
100277110

.
osa-u.5
for
9271563

.
ath-u.5
for
LFR

.
gma-u.5
for
100814807

.
gma-u.5
for
100790539

.
sly-u.5
for
101261958

.
sly-u.5
for
101257736

.
vvi-u.5
for
100240806

.
ppo-u.5
for
7467516

.
mtr-u.5
for
25482934

.


Ortholog ID: 8479
Species ath gma gma sly sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol LFR LOC100790539 LOC100814807 LOC101257736 LOC101261958 LOC9271563 LOC100277110 LOC103868950 LOC100240806 LOC7467516 LOC25482934 LOC123127555 LOC123137301 LOC123402049 LOC107910616 LOC107914994 LOC106401808 LOC106451783 LOC8055439 LOC102594360 LOC102582931 LOC102608380 LOC100822874 LOC107761671 LOC107804220
Function* ARM repeat superfamily protein armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR-like uncharacterized LOC100277110 armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR-like armadillo repeat-containing protein LFR-like armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04120 Ubiquitin mediated proteolysis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03040 Spliceosome 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821873 100790539 100814807 101257736 101261958 9271563 100277110 103868950 100240806 7467516 25482934 123127555 123137301 123402049 107910616 107914994 106401808 106451783 8055439 102594360 102582931 102608380 100822874 107761671 107804220
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