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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100277695   DNA-(apurinic or apyrimidinic site) lyase 
 zma-r.6   100277695   DNA-(apurinic or apyrimidinic site) lyase 
 zma-m.5   100277695   DNA-(apurinic or apyrimidinic site) lyase 
 sbi-r.1   8076531   DNA-(apurinic or apyrimidinic site) lyase 
 osa-u.5   4351982   DNA-(apurinic or apyrimidinic site) endonuclease 
 tae-r.2   123096207   DNA-(apurinic or apyrimidinic site) endonuclease 
 tae-r.2   123091219   DNA-(apurinic or apyrimidinic site) endonuclease 
 tae-r.2   123086761   DNA-(apurinic or apyrimidinic site) endonuclease 
 hvu-r.1   123447833   DNA-(apurinic or apyrimidinic site) endonuclease 
 bdi-r.1   100839762   DNA-(apurinic or apyrimidinic site) lyase 
 ath-u.5   AT3G48425   DNAse I-like superfamily protein 
 gma-u.5   100817167   DNA-(apurinic or apyrimidinic site) endonuclease 
 sly-u.5   101256863   DNA-(apurinic or apyrimidinic site) endonuclease 
 bra-r.6   103873147   DNA-(apurinic or apyrimidinic site) lyase 
 vvi-u.5   100258672   DNA-(apurinic or apyrimidinic site) endonuclease 
 ppo-u.5   7453820   DNA-(apurinic or apyrimidinic site) endonuclease 
 ghi-r.1   121224261   DNA-(apurinic or apyrimidinic site) endonuclease 
 ghi-r.1   121211058   DNA-(apurinic or apyrimidinic site) endonuclease 
 bna-r.1   106428618   DNA-(apurinic or apyrimidinic site) endonuclease 
 bna-r.1   106428922   DNA-(apurinic or apyrimidinic site) endonuclease 
 sot-r.1   102605533   DNA-(apurinic or apyrimidinic site) lyase 
 cit-r.1   102614833   DNA-(apurinic or apyrimidinic site) endonuclease 
 nta-r.1   107791366   DNA-(apurinic or apyrimidinic site) endonuclease 
 nta-r.1   107760922   DNA-(apurinic or apyrimidinic site) endonuclease 

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Top 50 coexpressed genes to 100277695 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100277695 (zma-u.5 coexpression data)

CoexMap"100277695"


zmaLOC100277695 | Entrez gene ID : 100277695      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo ghi bna sot cit nta mtr cre
Paralog 3 1 1 3 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006284 [list] [network] base-excision repair  (35 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0008311 [list] [network] double-stranded DNA 3'-5' DNA exonuclease activity  (6 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (8 genes)  IEA  
GO:0008081 [list] [network] phosphoric diester hydrolase activity  (62 genes)  IEA  
Protein NP_001144669.1 [sequence] [blastp]
XP_008661773.1 [sequence] [blastp]
XP_008661774.1 [sequence] [blastp]
XP_020400585.1 [sequence] [blastp]
XP_035818898.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001144669.1)
nucl 5,  mito 2,  chlo 1,  cysk 1,  golg 1  (predict for XP_008661773.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_008661774.1)
nucl 7,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for XP_020400585.1)
nucl 8,  mito 1  (predict for XP_035818898.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001144669.1)
other 7,  mito 3  (predict for XP_008661773.1)
other 7,  mito 3  (predict for XP_008661774.1)
other 7,  mito 3  (predict for XP_020400585.1)
other 7,  mito 3  (predict for XP_035818898.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100277695
zma-r.6
for
100277695
zma-m.5
for
100277695
sbi-r.1
for
8076531
osa-u.5
for
4351982
tae-r.2
for
123096207
tae-r.2
for
123091219
tae-r.2
for
123086761
hvu-r.1
for
123447833
bdi-r.1
for
100839762
ath-u.5
for
AT3G48425
gma-u.5
for
100817167
sly-u.5
for
101256863
bra-r.6
for
103873147
vvi-u.5
for
100258672
ppo-u.5
for
7453820
ghi-r.1
for
121224261
ghi-r.1
for
121211058
bna-r.1
for
106428618
bna-r.1
for
106428922
sot-r.1
for
102605533
cit-r.1
for
102614833
nta-r.1
for
107791366
nta-r.1
for
107760922


Ortholog ID: 11334
Species zma sbi osa tae tae tae hvu bdi ath gma sly bra vvi ppo ghi ghi bna bna sot cit nta nta
Symbol LOC100277695 LOC8076531 LOC4351982 LOC123096207 LOC123091219 LOC123086761 LOC123447833 LOC100839762 AT3G48425 LOC100817167 LOC101256863 LOC103873147 LOC100258672 LOC7453820 LOC121224261 LOC121211058 LOC106428618 LOC106428922 LOC102605533 LOC102614833 LOC107791366 LOC107760922
Function* DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNAse I-like superfamily protein DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease DNA-(apurinic or apyrimidinic site) endonuclease
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03040 Spliceosome 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100277695 8076531 4351982 123096207 123091219 123086761 123447833 100839762 824001 100817167 101256863 103873147 100258672 7453820 121224261 121211058 106428618 106428922 102605533 102614833 107791366 107760922
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