ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100278340	uncharacterized LOC100278340
zma-r.6	100278340	uncharacterized LOC100278340
zma-m.5	100278340	uncharacterized LOC100278340
zma-u.5	103631010	histone H4
zma-u.5	103633139	histone H4
zma-u.5	100282268	uncharacterized LOC100282268
sbi-r.1	8085439	histone H4
sbi-r.1	8077977	histone H4
sbi-r.1	8074181	histone H4
osa-u.5	4336777	histone H4
osa-u.5	4339029	histone H4
osa-u.5	4339049	histone H4
tae-r.2	123049796	histone H4
tae-r.2	123087709	histone H4
tae-r.2	123104715	histone H4
hvu-r.1	123400672	uncharacterized LOC123400672
hvu-r.1	123424203	histone H4
hvu-r.1	123397931	histone H4
bdi-r.1	100824697	histone H4
bdi-r.1	100823315	histone H4
bdi-r.1	100845127	histone H4
ath-u.5	AT5G59970	Histone superfamily protein
ath-u.5	AT1G07820	Histone superfamily protein
ath-u.5	AT1G07660	Histone superfamily protein
gma-u.5	100793106	histone H4
gma-u.5	100305586	histone H4
gma-u.5	100777359	histone H4
sly-u.5	101264401	histone H4
sly-u.5	101252889	histone H4
sly-u.5	101252991	histone H4
bra-r.6	103843434	histone H4
bra-r.6	103856615	histone H4
bra-r.6	103841295	histone H4
vvi-u.5	100267358	histone H4
vvi-u.5	100244527	uncharacterized LOC100244527
vvi-u.5	100263191	histone H4
ppo-u.5	7488974	histone H4
ppo-u.5	7495538	histone H4
ppo-u.5	7488973	histone H4
mtr-u.5	25490772	uncharacterized LOC25490772
mtr-u.5	11446478	histone H4
mtr-u.5	25489049	histone H4
ghi-r.1	107938428	uncharacterized LOC107938428
ghi-r.1	107885932	histone H4
ghi-r.1	107934611	histone H4
bna-r.1	106346382	histone H4
bna-r.1	106451040	histone H4
bna-r.1	106447366	histone H4
sot-r.1	102604795	histone H4
sot-r.1	102590781	uncharacterized LOC102590781
sot-r.1	102591967	uncharacterized LOC102591967
cit-r.1	102607827	histone H4
cit-r.1	102614670	histone H4
cit-r.1	102629767	histone H4
nta-r.1	107797227	histone H4
nta-r.1	107797021	histone H4
nta-r.1	107783210	histone H4
cre-r.1	CHLRE_17g714600v5	uncharacterized protein
cre-r.1	CHLRE_06g268000v5	uncharacterized protein
cre-r.1	CHLRE_17g711800v5	uncharacterized protein

Top 50 coexpressed genes to 100278340 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100278340 (zma-u.5 coexpression data)

CoexMap"100278340"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000786 [list] [network] nucleosome

(103 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(90 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(141 genes)	IEA
GO:0003677 [list] [network] DNA binding	(2288 genes)	IEA

Protein

NP_001278493.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3

(predict for NP_001278493.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for NP_001278493.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100278340	zma-r.6 for 100278340	zma-m.5 for 100278340	zma-u.5 for 103631010	zma-u.5 for 103633139	zma-u.5 for 100282268	sbi-r.1 for 8085439	sbi-r.1 for 8077977	sbi-r.1 for 8074181	osa-u.5 for 4336777	osa-u.5 for 4339029	osa-u.5 for 4339049	tae-r.2 for 123049796	tae-r.2 for 123087709	tae-r.2 for 123104715	hvu-r.1 for 123400672	hvu-r.1 for 123424203	hvu-r.1 for 123397931	bdi-r.1 for 100824697	bdi-r.1 for 100823315	bdi-r.1 for 100845127	ath-u.5 for AT5G59970	ath-u.5 for AT1G07820	ath-u.5 for AT1G07660	gma-u.5 for 100793106	gma-u.5 for 100305586	gma-u.5 for 100777359	sly-u.5 for 101264401	sly-u.5 for 101252889	sly-u.5 for 101252991	bra-r.6 for 103843434	bra-r.6 for 103856615	bra-r.6 for 103841295	vvi-u.5 for 100267358	vvi-u.5 for 100244527	vvi-u.5 for 100263191	ppo-u.5 for 7488974	ppo-u.5 for 7495538	ppo-u.5 for 7488973	mtr-u.5 for 25490772	mtr-u.5 for 11446478	mtr-u.5 for 25489049	ghi-r.1 for 107938428	ghi-r.1 for 107885932	ghi-r.1 for 107934611	bna-r.1 for 106346382	bna-r.1 for 106451040	bna-r.1 for 106447366	sot-r.1 for 102604795	sot-r.1 for 102590781	sot-r.1 for 102591967	cit-r.1 for 102607827	cit-r.1 for 102614670	cit-r.1 for 102629767	nta-r.1 for 107797227	nta-r.1 for 107797021	nta-r.1 for 107783210	cre-r.1 for CHLRE_17g714600v5	cre-r.1 for CHLRE_06g268000v5	cre-r.1 for CHLRE_17g711800v5

Ortholog

Ortholog ID: 87

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HIS4

Function^*

uncharacterized LOC100278340

histone H4

Histone superfamily protein

histone H4

uncharacterized LOC100244527

histone H4

uncharacterized LOC107932445

histone H4

uncharacterized LOC102605056

histone H4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00240	Pyrimidine metabolism	3
vvi01232	Nucleotide metabolism	3
vvi03030	DNA replication	2
vvi03420	Nucleotide excision repair	2
vvi03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2
sot03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

100278340

103636523

103633162

8077977

8061791

8060296

4339029

4349248

9270544

123041830

123046420

123065861

123445002

123401490

123413523

100823315

100843591

100845838

836119

837279

817423

100793106

100800769

100804633

101264401

101252889

103841295

103865608

103829765

100267358

100244527

100263191

18099206

18099209

18100499

25497863

11440148

11433555

107932686

107932445

107959073

106447366

106437381

106347525

102597419

102605056

102605372

102614670

102629767

102630591

107777308

107798291

107816714

66055937

66053633

5716482

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100278340 (zma-u.5 coexpression data)

Top 50 enrichment test to 100278340 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**