ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100279440	Octicosapeptide/Phox/Bem1p family protein
zma-r.6	100279440	Octicosapeptide/Phox/Bem1p family protein
zma-u.5	103649801	leucine-rich repeat extensin-like protein 2
osa-u.5	4325473	leucine-rich repeat extensin-like protein 2
ath-u.5	PDE331	Octicosapeptide/Phox/Bem1p family protein
ath-u.5	AT3G18230	Octicosapeptide/Phox/Bem1p family protein
gma-u.5	100784396	neurogenic protein mastermind
gma-u.5	100797907	uncharacterized LOC100797907
gma-u.5	100805172	uncharacterized LOC100805172
sly-u.5	101244569	uncharacterized LOC101244569
sly-u.5	101252579	RAF-like serine/threonine-protein kinase PRAF
sly-u.5	101268863	protein PAL OF QUIRKY
vvi-u.5	100250808	protein PAL OF QUIRKY
ppo-u.5	7482856	uncharacterized LOC7482856
ppo-u.5	7459817	uncharacterized LOC7459817
mtr-u.5	11423547	uncharacterized LOC11423547
mtr-u.5	25485469	putative mediator of RNA polymerase II transcription subunit 12

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4389 genes)

IEA

Protein

NP_001145919.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_001145919.1)

Subcellular
localization
TargetP

other 7, chlo 4

(predict for NP_001145919.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100279440	zma-r.6 for 100279440	zma-u.5 for 103649801	osa-u.5 for 4325473	ath-u.5 for PDE331	ath-u.5 for AT3G18230	gma-u.5 for 100784396	gma-u.5 for 100797907	gma-u.5 for 100805172	sly-u.5 for 101244569	sly-u.5 for 101252579	sly-u.5 for 101268863	vvi-u.5 for 100250808	ppo-u.5 for 7482856	ppo-u.5 for 7459817	mtr-u.5 for 11423547	mtr-u.5 for 25485469

Ortholog

Ortholog ID: 2606

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

PDE331

Function^*

leucine-rich repeat extensin-like protein 2

Octicosapeptide/Phox/Bem1p family protein

RNA polymerase II degradation factor 1

leucine-rich repeat extensin-like protein 2

RNA polymerase II degradation factor 1

ataxin-2 homolog

trithorax group protein osa

Octicosapeptide/Phox/Bem1p family protein

neurogenic protein mastermind

protein PAL OF QUIRKY

uncharacterized LOC101244569

uncharacterized LOC103838209

R3H domain-containing protein 2

protein PAL OF QUIRKY

uncharacterized LOC7482856

uncharacterized LOC11423547

probable serine/threonine-protein kinase yakA

uncharacterized LOC107903879

uncharacterized BNAA09G18520D

uncharacterized LOC102590490

activating signal cointegrator 1 complex subunit 2 homolog

uncharacterized LOC102609615

uncharacterized LOC107784491

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	4
bdi04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2
gma03272	Virion - Hepatitis viruses	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	3
bra00051	Fructose and mannose metabolism	3
bra00052	Galactose metabolism	3
bra00500	Starch and sucrose metabolism	3
bra00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00541	Biosynthesis of various nucleotide sugars	3
bna01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

103649801

100279440

8060830

4325473

123059998

123068462

123442587

100836637

814647

821351

100784396

100775954

101268863

101244569

103838209

103839502

100250808

7482856

11423547

107926629

107903879

106432059

102590490

102587767

102609615

107784491

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100279440 (zma-u.5 coexpression data)

Top 50 enrichment test to 100279440 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	2	3	3	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100279440 (zma-u.5 coexpression data)

Top 50 enrichment test to 100279440 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**