ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100279467	uncharacterized LOC100279467
zma-r.6	100279467	uncharacterized LOC100279467
zma-u.5	103629190	interactor of constitutive active ROPs 2, chloroplastic
zma-u.5	103651046	interactor of constitutive active ROPs 2, chloroplastic-like
sbi-r.1	8068156	interactor of constitutive active ROPs 2, chloroplastic
sbi-r.1	8057757	interactor of constitutive active ROPs 2, chloroplastic
osa-u.5	4327411	interactor of constitutive active ROPs 2, chloroplastic
osa-u.5	4337660	interactor of constitutive active ROPs 2, chloroplastic
tae-r.2	123180188	interactor of constitutive active ROPs 2, chloroplastic
tae-r.2	123062503	interactor of constitutive active ROPs 2, chloroplastic
tae-r.2	123071310	interactor of constitutive active ROPs 2, chloroplastic
hvu-r.1	123405302	interactor of constitutive active ROPs 2, chloroplastic
hvu-r.1	123444971	interactor of constitutive active ROPs 2, chloroplastic-like
bdi-r.1	100830424	interactor of constitutive active ROPs 2, chloroplastic
bdi-r.1	100830301	interactor of constitutive active ROPs 2, chloroplastic
ath-u.5	RIP2	ROP interactive partner 3
ath-u.5	RIP5	ROP interactive partner 5
gma-u.5	100781372	interactor of constitutive active ROPs 2, chloroplastic
gma-u.5	100798862	interactor of constitutive active ROPs 3
gma-u.5	100788449	interactor of constitutive active ROPs 3
sly-u.5	101251636	interactor of constitutive active ROPs 2, chloroplastic-like
sly-u.5	101255915	interactor of constitutive active ROPs 2, chloroplastic
sly-u.5	101245112	interactor of constitutive active ROPs 3
bra-r.6	103867227	interactor of constitutive active ROPs 2, chloroplastic
bra-r.6	103857655	interactor of constitutive active ROPs 2, chloroplastic
bra-r.6	103851517	interactor of constitutive active ROPs 3
vvi-u.5	100265405	interactor of constitutive active ROPs 2, chloroplastic
vvi-u.5	100267374	interactor of constitutive active ROPs 3
ppo-u.5	7467606	interactor of constitutive active ROPs 2, chloroplastic
ppo-u.5	18100229	interactor of constitutive active ROPs 2, chloroplastic
mtr-u.5	11430656	interactor of constitutive active ROPs 2, chloroplastic
mtr-u.5	25484042	interactor of constitutive active ROPs 2, chloroplastic
ghi-r.1	121229277	interactor of constitutive active ROPs 3
ghi-r.1	107891498	interactor of constitutive active ROPs 3
ghi-r.1	107891107	interactor of constitutive active ROPs 2, chloroplastic
bna-r.1	106385818	interactor of constitutive active ROPs 3
bna-r.1	106392633	interactor of constitutive active ROPs 2, chloroplastic-like
bna-r.1	106398760	interactor of constitutive active ROPs 2, chloroplastic-like
sot-r.1	102589301	interactor of constitutive active ROPs 2, chloroplastic-like
sot-r.1	102583027	interactor of constitutive active ROPs 2, chloroplastic
sot-r.1	102600795	interactor of constitutive active ROPs 3-like
cit-r.1	102621576	interactor of constitutive active ROPs 2, chloroplastic
cit-r.1	102626539	interactor of constitutive active ROPs 3
nta-r.1	107802979	interactor of constitutive active ROPs 3-like
nta-r.1	107809539	interactor of constitutive active ROPs 3
nta-r.1	107811881	interactor of constitutive active ROPs 2, chloroplastic

Top 50 coexpressed genes to 100279467 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100279467 (zma-u.5 coexpression data)

CoexMap"100279467"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001145943.1 [sequence] [blastp]
XP_008654808.1 [sequence] [blastp]
XP_008654809.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1	(predict for NP_001145943.1)
chlo 8, nucl 1	(predict for XP_008654808.1)
chlo 5, nucl 4	(predict for XP_008654809.1)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001145943.1)
chlo 9	(predict for XP_008654808.1)
chlo 7, mito 3	(predict for XP_008654809.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100279467	zma-r.6 for 100279467	zma-u.5 for 103629190	zma-u.5 for 103651046	sbi-r.1 for 8068156	sbi-r.1 for 8057757	osa-u.5 for 4327411	osa-u.5 for 4337660	tae-r.2 for 123180188	tae-r.2 for 123062503	tae-r.2 for 123071310	hvu-r.1 for 123405302	hvu-r.1 for 123444971	bdi-r.1 for 100830424	bdi-r.1 for 100830301	ath-u.5 for RIP2	ath-u.5 for RIP5	gma-u.5 for 100781372	gma-u.5 for 100798862	gma-u.5 for 100788449	sly-u.5 for 101251636	sly-u.5 for 101255915	sly-u.5 for 101245112	bra-r.6 for 103867227	bra-r.6 for 103857655	bra-r.6 for 103851517	vvi-u.5 for 100265405	vvi-u.5 for 100267374	ppo-u.5 for 7467606	ppo-u.5 for 18100229	mtr-u.5 for 11430656	mtr-u.5 for 25484042	ghi-r.1 for 121229277	ghi-r.1 for 107891498	ghi-r.1 for 107891107	bna-r.1 for 106385818	bna-r.1 for 106392633	bna-r.1 for 106398760	sot-r.1 for 102589301	sot-r.1 for 102583027	sot-r.1 for 102600795	cit-r.1 for 102621576	cit-r.1 for 102626539	nta-r.1 for 107802979	nta-r.1 for 107809539	nta-r.1 for 107811881

Ortholog

Ortholog ID: 1493

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

RIP2

RIP5

Function^*

uncharacterized LOC100279467