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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100279516   uncharacterized LOC100279516 
 zma-r.6   100279516   uncharacterized LOC100279516 
 zma-m.5   100279516   uncharacterized LOC100279516 
 zma-u.5   103631276   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100281056   copine-1 
 zma-u.5   100279782   E3 ubiquitin-protein ligase RGLG1 
 osa-u.5   4324990   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4341497   E3 ubiquitin-protein ligase RGLG2 
 ath-u.5   RGLG1   RING domain ligase1 
 ath-u.5   RGLG2   RING domain ligase2 
 ath-u.5   AT1G67800   Copine (Calcium-dependent phospholipid-binding protein) family 
 gma-u.5   100790937   E3 ubiquitin-protein ligase RGLG5 
 gma-u.5   100809850   E3 ubiquitin-protein ligase RGLG2-like 
 gma-u.5   100800161   E3 ubiquitin-protein ligase RGLG5 
 sly-u.5   RFP1   E3 ubiquitin-protein ligase RGLG2-like 
 sly-u.5   101249812   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100251913   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100255057   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100247388   E3 ubiquitin-protein ligase RGLG2 
 ppo-u.5   7473198   E3 ubiquitin-protein ligase RGLG5 
 ppo-u.5   7484434   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11422178   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11408827   E3 ubiquitin-protein ligase RGLG2 

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Top 50 coexpressed genes to 100279516 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100279516 (zma-u.5 coexpression data)

CoexMap"100279516"


zmaLOC100279516 | Entrez gene ID : 100279516      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 6 2 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (430 genes)  IEA  
Protein NP_001145987.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 4,  chlo 1,  extr 1  (predict for NP_001145987.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001145987.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100279516
zma-r.6
for
100279516
zma-m.5
for
100279516
zma-u.5
for
103631276
zma-u.5
for
100281056
zma-u.5
for
100279782
osa-u.5
for
4324990
osa-u.5
for
4341497
ath-u.5
for
RGLG1
ath-u.5
for
RGLG2
ath-u.5
for
AT1G67800
gma-u.5
for
100790937
gma-u.5
for
100809850
gma-u.5
for
100800161
sly-u.5
for
RFP1
sly-u.5
for
101249812
vvi-u.5
for
100251913
vvi-u.5
for
100255057
vvi-u.5
for
100247388
ppo-u.5
for
7473198
ppo-u.5
for
7484434
mtr-u.5
for
25501829
mtr-u.5
for
11422178
mtr-u.5
for
11408827


Ortholog ID: 954
Species zma zma sbi sbi osa tae hvu hvu bdi bdi ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna sot sot cit cit nta nta cre cre
Symbol LOC103631276 LOC100279516 LOC110431341 LOC8078706 LOC4352002 LOC123157038 LOC123411523 LOC123411526 LOC100830231 LOC100833247 RGLG2 AT1G67800 LOC100790800 LOC100799565 LOC101249812 RFP1 LOC103870996 LOC103846485 LOC100251913 LOC100255057 LOC7484434 LOC7473198 LOC11435543 LOC25489533 LOC107892243 LOC121224251 LOC106353976 LOC102595336 LOC102585646 LOC102630950 LOC102623356 LOC107793203 LOC107799607 CHLRE_09g399550v5 CHLRE_09g399915v5
Function* E3 ubiquitin-protein ligase RGLG2 uncharacterized LOC100279516 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG5-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG3 RING domain ligase2 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04148 Efferocytosis 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae00590 Arachidonic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03010 Ribosome 2
ppo03060 Protein export 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 12
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103631276 100279516 110431341 8078706 4352002 123157038 123411523 123411526 100830231 100833247 831293 843106 100790800 100799565 101249812 101258318 103870996 103846485 100251913 100255057 7484434 7473198 11435543 25489533 107892243 121224251 106353976 102595336 102585646 102630950 102623356 107793203 107799607 5720678 66054764
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