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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100279731   uncharacterized LOC100279731 
 zma-r.6   100279731   uncharacterized LOC100279731 
 zma-u.5   100216783   Switch/sucrose nonfermenting 3C 
 osa-u.5   4349954   SWI/SNF complex subunit SWI3C 
 osa-u.5   9266524   SWI/SNF complex subunit SWI3C homolog 
 ath-u.5   SWI3C   SWITCH/sucrose nonfermenting 3C 
 gma-u.5   732600   SWI/SNF complex subunit SWI3C 
 gma-u.5   100790286   SWI/SNF complex subunit SWI3C 
 gma-u.5   100792929   SWI/SNF complex subunit SWI3C 
 sly-u.5   SWI3C   SWI/SNF complex subunit SWI3C 
 vvi-u.5   100253973   SWI/SNF complex subunit SWI3C 
 ppo-u.5   7460970   SWI/SNF complex subunit SWI3C 
 ppo-u.5   18096212   SWI/SNF complex subunit SWI3C 
 mtr-u.5   11422202   SWI/SNF complex subunit SWI3C 

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Top 50 coexpressed genes to 100279731 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100279731 (zma-u.5 coexpression data)

CoexMap"100279731"


zmaLOC100279731 | Entrez gene ID : 100279731      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03082 [list] [network] ATP-dependent chromatin remodeling (89 genes)
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001146162.1 [sequence] [blastp]
XP_008677113.2 [sequence] [blastp]
XP_008677114.2 [sequence] [blastp]
XP_035822764.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 1,  cysk_nucl 1  (predict for NP_001146162.1)
chlo 4,  nucl 2,  mito 1,  cysk_nucl 1  (predict for XP_008677113.2)
nucl 6,  chlo 1,  cysk 1,  plas 1,  cyto_mito 1  (predict for XP_008677114.2)
nucl 6,  chlo 1,  cysk 1,  plas 1,  cyto_mito 1  (predict for XP_035822764.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001146162.1)
mito 4,  other 3  (predict for XP_008677113.2)
mito 6  (predict for XP_008677114.2)
mito 6  (predict for XP_035822764.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100279731
zma-r.6
for
100279731
zma-u.5
for
100216783
osa-u.5
for
4349954
osa-u.5
for
9266524
ath-u.5
for
SWI3C
gma-u.5
for
732600
gma-u.5
for
100790286
gma-u.5
for
100792929
sly-u.5
for
SWI3C
vvi-u.5
for
100253973
ppo-u.5
for
7460970
ppo-u.5
for
18096212
mtr-u.5
for
11422202


Ortholog ID: 5202
Species zma sbi sbi osa osa tae tae hvu hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100279731 LOC8079896 LOC8079740 LOC4349954 LOC9266524 LOC123102839 LOC123111060 LOC123447935 LOC123451881 LOC100826600 SWI3C LOC100790286 LOC100792929 SWI3C LOC103835734 LOC103873013 LOC100253973 LOC18096212 LOC7460970 LOC11422202 LOC107951483 LOC107905227 LOC106446602 LOC106401329 LOC102579842 LOC102615206 LOC107810873 LOC107775805 CHLRE_08g364050v5
Function* uncharacterized LOC100279731 SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C homolog SWI/SNF complex subunit SWI3C SWITCH/sucrose nonfermenting 3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C SWI/SNF complex subunit SWI3C-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa03018 RNA degradation 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03022 Basal transcription factors 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03250 Viral life cycle - HIV-1 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 10
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100279731 8079896 8079740 4349954 9266524 123102839 123111060 123447935 123451881 100826600 838774 100790286 100792929 101264940 103835734 103873013 100253973 18096212 7460970 11422202 107951483 107905227 106446602 106401329 102579842 102615206 107810873 107775805 66054330
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