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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280305   uncharacterized LOC100280305 
 zma-r.6   100280305   uncharacterized LOC100280305 
 zma-m.5   100280305   uncharacterized LOC100280305 
 sbi-r.1   8055688   probable homogentisate phytyltransferase 2, chloroplastic 
 osa-u.5   4343702   probable homogentisate phytyltransferase 2, chloroplastic 
 tae-r.2   123182829   probable homogentisate phytyltransferase 2, chloroplastic 
 tae-r.2   123142883   probable homogentisate phytyltransferase 2, chloroplastic 
 tae-r.2   123065273   probable homogentisate phytyltransferase 2, chloroplastic 
 hvu-r.1   123448160   probable homogentisate phytyltransferase 2, chloroplastic 
 bdi-r.1   100825292   probable homogentisate phytyltransferase 2, chloroplastic 
 ath-u.5   HST   homogentisate prenyltransferase 
 gma-u.5   VTE2-2   homogentisate phytyltransferase VTE2-2 
 gma-u.5   106794098   homogentisate solanesyltransferase, chloroplastic 
 sly-u.5   101261100   homogentisate solanesyltransferase, chloroplastic 
 bra-r.6   103870296   homogentisate solanesyltransferase, chloroplastic 
 bra-r.6   103859421   homogentisate solanesyltransferase, chloroplastic 
 vvi-u.5   100264108   homogentisate solanesyltransferase, chloroplastic 
 ppo-u.5   7479502   homogentisate solanesyltransferase, chloroplastic 
 mtr-u.5   25483545   homogentisate solanesyltransferase, chloroplastic 
 ghi-r.1   107891223   homogentisate solanesyltransferase, chloroplastic 
 ghi-r.1   107889470   homogentisate solanesyltransferase, chloroplastic 
 bna-r.1   106353069   homogentisate solanesyltransferase, chloroplastic 
 bna-r.1   106452511   homogentisate solanesyltransferase, chloroplastic 
 bna-r.1   106415089   homogentisate solanesyltransferase, chloroplastic 
 sot-r.1   102594989   homogentisate solanesyltransferase, chloroplastic 
 cit-r.1   102623177   homogentisate solanesyltransferase, chloroplastic 
 nta-r.1   107817989   homogentisate solanesyltransferase, chloroplastic 
 nta-r.1   107825180   homogentisate solanesyltransferase, chloroplastic 
 cre-r.1   CHLRE_06g283750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100280305 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280305 (zma-u.5 coexpression data)

CoexMap"100280305"


zmaLOC100280305 | Entrez gene ID : 100280305      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (54 genes)
zma01240 [list] [network] Biosynthesis of cofactors (295 genes)
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3751 genes)  IEA  
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (40 genes)  IEA  
Protein NP_001146703.1 [sequence] [blastp]
XP_008667862.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  E.R. 1  (predict for NP_001146703.1)
chlo 9,  mito 1,  E.R. 1  (predict for XP_008667862.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001146703.1)
chlo 8  (predict for XP_008667862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280305
zma-r.6
for
100280305
zma-m.5
for
100280305
sbi-r.1
for
8055688
osa-u.5
for
4343702
tae-r.2
for
123182829
tae-r.2
for
123142883
tae-r.2
for
123065273
hvu-r.1
for
123448160
bdi-r.1
for
100825292
ath-u.5
for
HST
gma-u.5
for
VTE2-2
gma-u.5
for
106794098
sly-u.5
for
101261100
bra-r.6
for
103870296
bra-r.6
for
103859421
vvi-u.5
for
100264108
ppo-u.5
for
7479502
mtr-u.5
for
25483545
ghi-r.1
for
107891223
ghi-r.1
for
107889470
bna-r.1
for
106353069
bna-r.1
for
106452511
bna-r.1
for
106415089
sot-r.1
for
102594989
cit-r.1
for
102623177
nta-r.1
for
107817989
nta-r.1
for
107825180
cre-r.1
for
CHLRE_06g283750v5


Ortholog ID: 8788
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100280305 LOC8055688 LOC4343702 LOC123182829 LOC123142883 LOC123065273 LOC123448160 LOC100825292 HST VTE2-2 LOC106794098 LOC101261100 LOC103870296 LOC103859421 LOC100264108 LOC7479502 LOC25483545 LOC107891223 LOC107889470 LOC106353069 LOC106452511 LOC106401877 LOC102594989 LOC102623177 LOC107817989 LOC107825180 CHLRE_06g283750v5
Function* uncharacterized LOC100280305 probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic probable homogentisate phytyltransferase 2, chloroplastic homogentisate prenyltransferase homogentisate phytyltransferase VTE2-2 homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic-like homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic homogentisate solanesyltransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi00051 Fructose and mannose metabolism 2
sbi00330 Arginine and proline metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 3
osa01230 Biosynthesis of amino acids 2
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00860 Porphyrin metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00010 Glycolysis / Gluconeogenesis 2
bdi01200 Carbon metabolism 2
bdi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01230 Biosynthesis of amino acids 3
ath01240 Biosynthesis of cofactors 3
ath00910 Nitrogen metabolism 3
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01200 Carbon metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00710 Carbon fixation by Calvin cycle 3
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi01240 Biosynthesis of cofactors 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 3
mtr01200 Carbon metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00010 Glycolysis / Gluconeogenesis 3
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100280305 8055688 4343702 123182829 123142883 123065273 123448160 100825292 5007993 732619 106794098 101261100 103870296 103859421 100264108 7479502 25483545 107891223 107889470 106353069 106452511 106401877 102594989 102623177 107817989 107825180 5720967
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