ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100280536	YLS5
zma-r.6	100280536	YLS5
zma-m.5	100280536	YLS5
sbi-r.1	8082591	protein DJ-1 homolog D
osa-u.5	4337361	protein DJ-1 homolog D
tae-r.2	123190979	protein DJ-1 homolog D
tae-r.2	123055126	protein DJ-1 homolog D
tae-r.2	123047323	protein DJ-1 homolog D
hvu-r.1	123428405	protein DJ-1 homolog D
bdi-r.1	100841497	protein DJ-1 homolog D
ath-u.5	DJ1D	Class I glutamine amidotransferase-like superfamily protein
gma-u.5	100791599	protein DJ-1 homolog D
sly-u.5	101263864	protein DJ-1 homolog D
bra-r.6	103870900	protein DJ-1 homolog D
vvi-u.5	100247956	protein DJ-1 homolog D
ppo-u.5	18106498	protein DJ-1 homolog D
ppo-u.5	7494513	protein DJ-1 homolog D
ppo-u.5	7494515	protein DJ-1 homolog D
mtr-u.5	11411229	protein DJ-1 homolog D
ghi-r.1	107953939	protein DJ-1 homolog D
ghi-r.1	107899375	protein DJ-1 homolog D
bna-r.1	106453221	protein DJ-1 homolog D
bna-r.1	125609155	protein DJ-1 homolog D
sot-r.1	102591897	protein DJ-1 homolog D
cit-r.1	102624325	protein DJ-1 homolog D
nta-r.1	107790977	protein DJ-1 homolog D-like
nta-r.1	107783336	protein DJ-1 homolog D

Annotation

functional annotation

KEGG

zma00620 [list] [network] Pyruvate metabolism (118 genes)

GO BP

GO CC

GO MF

Protein

NP_001146927.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, pero 2

(predict for NP_001146927.1)

Subcellular
localization
TargetP

scret 7, other 5

(predict for NP_001146927.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100280536	zma-r.6 for 100280536	zma-m.5 for 100280536	sbi-r.1 for 8082591	osa-u.5 for 4337361	tae-r.2 for 123190979	tae-r.2 for 123055126	tae-r.2 for 123047323	hvu-r.1 for 123428405	bdi-r.1 for 100841497	ath-u.5 for DJ1D	gma-u.5 for 100791599	sly-u.5 for 101263864	bra-r.6 for 103870900	vvi-u.5 for 100247956	ppo-u.5 for 18106498	ppo-u.5 for 7494513	ppo-u.5 for 7494515	mtr-u.5 for 11411229	ghi-r.1 for 107953939	ghi-r.1 for 107899375	bna-r.1 for 106453221	bna-r.1 for 125609155	sot-r.1 for 102591897	cit-r.1 for 102624325	nta-r.1 for 107790977	nta-r.1 for 107783336

Ortholog

Ortholog ID: 9482

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

DJ1D

Function^*

YLS5

protein DJ-1 homolog D

Class I glutamine amidotransferase-like superfamily protein

protein DJ-1 homolog D

protein DJ-1 homolog D-like

protein DJ-1 homolog D

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	3
sbi00510	N-Glycan biosynthesis	2
sbi00513	Various types of N-glycan biosynthesis	2
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	11
osa01200	Carbon metabolism	6
osa00710	Carbon fixation by Calvin cycle	4
osa01210	2-Oxocarboxylic acid metabolism	4
osa00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00620	Pyruvate metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	9
ath00010	Glycolysis / Gluconeogenesis	7
ath01200	Carbon metabolism	7
ath00020	Citrate cycle (TCA cycle)	5
ath00785	Lipoic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	6
bra00010	Glycolysis / Gluconeogenesis	4
bra00052	Galactose metabolism	4
bra00520	Amino sugar and nucleotide sugar metabolism	4
bra01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00620	Pyruvate metabolism	3
vvi00071	Fatty acid degradation	2
vvi00280	Valine, leucine and isoleucine degradation	2
vvi01200	Carbon metabolism	2
vvi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00620	Pyruvate metabolism	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00940	Phenylpropanoid biosynthesis	2
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	4
mtr01200	Carbon metabolism	3
mtr04142	Lysosome	2
mtr00240	Pyrimidine metabolism	2
mtr00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04144	Endocytosis	2
ghi00620	Pyruvate metabolism	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04144	Endocytosis	2
ghi00620	Pyruvate metabolism	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot00220	Arginine biosynthesis	2
sot01210	2-Oxocarboxylic acid metabolism	2
sot01230	Biosynthesis of amino acids	2
sot00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	5
nta00710	Carbon fixation by Calvin cycle	5
nta01200	Carbon metabolism	5
nta01230	Biosynthesis of amino acids	5
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	5
nta00710	Carbon fixation by Calvin cycle	5
nta01200	Carbon metabolism	5
nta01230	Biosynthesis of amino acids	5
nta00620	Pyruvate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100280536

8082591

4337361

123190979

123055126

123047323

123428405

100841497

820875

100791599

101263864

103870900

100247956

18106498

7494513

7494515

11411229

107953939

107899375

106453221

125609155

102591897

102624325

107790977

107783336

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100280536 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280536 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	3	1	1	1	1	1	1	1	3	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100280536 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280536 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**