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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280879   TTN10 
 zma-r.6   100280879   TTN10 
 zma-m.5   100280879   TTN10 
 zma-u.5   100285950   TTN10 
 osa-u.5   4345149   DNA replication complex GINS protein PSF3 
 ath-u.5   TTN10   GINS complex protein 
 ath-u.5   AT3G55490   GINS complex protein 
 gma-u.5   100799874   DNA replication complex GINS protein PSF3 
 gma-u.5   100797609   DNA replication complex GINS protein PSF3 
 sly-u.5   101265731   DNA replication complex GINS protein PSF3-like 
 ppo-u.5   7494491   DNA replication complex GINS protein PSF3 
 mtr-u.5   11406761   DNA replication complex GINS protein PSF3 

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Top 50 coexpressed genes to 100280879 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280879 (zma-u.5 coexpression data)

CoexMap"100280879"


zmaLOC100280879 | Entrez gene ID : 100280879      
Species zma osa ath gma sly ppo mtr sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 4 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902975 [list] [network] mitotic DNA replication initiation  (13 genes)  IEA  
GO CC
GO:0000811 [list] [network] GINS complex  (8 genes)  IEA  
GO MF
Protein NP_001147271.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  nucl_plas 2,  cyto 1  (predict for NP_001147271.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001147271.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280879

.
zma-r.6
for
100280879

.
zma-m.5
for
100280879

.
zma-u.5
for
100285950

.
osa-u.5
for
4345149

.
ath-u.5
for
TTN10

.
ath-u.5
for
AT3G55490

.
gma-u.5
for
100799874

.
gma-u.5
for
100797609

.
sly-u.5
for
101265731

.
ppo-u.5
for
7494491

.
mtr-u.5
for
11406761

.


Ortholog ID: 6132
Species ath ath gma gma sly osa zma zma bra ppo mtr hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta
Symbol TTN10 AT3G55490 LOC100799874 LOC100797609 LOC101265731 LOC4345149 LOC100280879 LOC100285950 LOC103865764 LOC7494491 LOC11406761 LOC123448893 LOC123444600 LOC107900442 LOC107917928 LOC106391817 LOC106447444 CHLRE_06g251750v5 LOC110436963 LOC102595186 LOC102606676 LOC100838810 LOC100829131 LOC107792848
Function* GINS complex protein GINS complex protein DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3-like DNA replication complex GINS protein PSF3 TTN10 TTN10 DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3 probable DNA replication complex GINS protein PSF3 probable DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3 uncharacterized LOC107917928 DNA replication complex GINS protein PSF3-like DNA replication complex GINS protein PSF3 uncharacterized protein DNA replication complex GINS protein PSF3-like DNA replication complex GINS protein PSF3-like DNA replication complex GINS protein PSF3 probable DNA replication complex GINS protein PSF3 probable DNA replication complex GINS protein PSF3 DNA replication complex GINS protein PSF3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma00561 Glycerolipid metabolism 2
gma00564 Glycerophospholipid metabolism 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
sly03082 ATP-dependent chromatin remodeling 2
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00061 Fatty acid biosynthesis 2
osa00062 Fatty acid elongation 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03018 RNA degradation 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu04814 Motor proteins 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838490 5008088 100799874 100797609 101265731 4345149 100280879 100285950 103865764 7494491 11406761 123448893 123444600 107900442 107917928 106391817 106447444 5722186 110436963 102595186 102606676 100838810 100829131 107792848
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